RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 ELOA3BQ3SY89 546 aa7.51□□□□□ -1.21
CBX3P1-201ENST00000325243 ELOA3Q8NG57 546 aa7.51□□□□□ -1.21
CBX3P1-201ENST00000325243 SFSWAPQ12872 951 aaKnown RBP7.5□□□□□ -1.21
CBX3P1-201ENST00000325243 SLC30A3Q99726 388 aa7.5□□□□□ -1.21
CBX3P1-201ENST00000325243 ZNF232Q9UNY5 417 aa7.5□□□□□ -1.21
CBX3P1-201ENST00000325243 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
CBX3P1-201ENST00000325243 SIN3BO75182 1162 aa7.49□□□□□ -1.21
CBX3P1-201ENST00000325243 SPATA31C1P0DKV0 1188 aa7.49□□□□□ -1.21
CBX3P1-201ENST00000325243 ADAMTS19Q8TE59 1207 aa7.49□□□□□ -1.21
CBX3P1-201ENST00000325243 ZBTB7BO15156 539 aaPredicted RBP7.48□□□□□ -1.21
CBX3P1-201ENST00000325243 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
CBX3P1-201ENST00000325243 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
CBX3P1-201ENST00000325243 STARD13Q9Y3M8 1113 aa7.48□□□□□ -1.21
CBX3P1-201ENST00000325243 SERTM1A2A2V5 107 aa7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 POM121CA8CG34 1229 aa7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 ALAS2P22557 587 aa7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 CLDN10P78369 228 aa7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 SEMA6BQ9H3T3 888 aa7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 GPC6Q9Y625 555 aaPredicted RBP7.47□□□□□ -1.21
CBX3P1-201ENST00000325243 M0R082 166 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 GATA4P43694 442 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 RAB44Q7Z6P3 723 aaPredicted RBP7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 ZNF417Q8TAU3 575 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 TNFRSF25Q93038 417 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 ZNF587Q96SQ5 575 aaPredicted RBP7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 TSPAN10Q9H1Z9 355 aaPredicted RBP7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 NEUROD4Q9HD90 331 aa7.46□□□□□ -1.22
CBX3P1-201ENST00000325243 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 ALBP02768 609 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 SPEM2Q0P670 501 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 C8orf86Q6ZUL3 223 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 TRIM50Q86XT4 487 aa7.45□□□□□ -1.22
CBX3P1-201ENST00000325243 PSMA6P60900 246 aaKnown RBP7.44□□□□□ -1.22
CBX3P1-201ENST00000325243 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
CBX3P1-201ENST00000325243 PLEKHM2Q8IWE5 1019 aa7.44□□□□□ -1.22
CBX3P1-201ENST00000325243 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
CBX3P1-201ENST00000325243 SPDYE3A6NKU9 549 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 ADH7P40394 386 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 RSPO4Q2I0M5 234 aaPredicted RBP7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 PRRT3Q5FWE3 981 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 C1orf53Q5VUE5 145 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 WWC1Q8IX03 1113 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 MICALL1Q8N3F8 863 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 CEP63Q96MT8 703 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 PRDM6Q9NQX0 595 aa7.43□□□□□ -1.22
CBX3P1-201ENST00000325243 NID1P14543 1247 aa7.42□□□□□ -1.22
CBX3P1-201ENST00000325243 ATP1A2P50993 1020 aa7.42□□□□□ -1.22
CBX3P1-201ENST00000325243 TYRO3Q06418 890 aa7.42□□□□□ -1.22
CBX3P1-201ENST00000325243 TSEN2Q8NCE0 465 aaKnown RBP7.42□□□□□ -1.22
CBX3P1-201ENST00000325243 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
CBX3P1-201ENST00000325243 SFI1A8K8P3 1242 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 C21orf2O43822 256 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 KCNQ4P56696 695 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 NKAPLQ5M9Q1 402 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 HDGFL1Q5TGJ6 251 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 C20orf204Q6ZNR8 217 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 OGFOD1Q8N543 542 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 SUSD3Q96L08 255 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
CBX3P1-201ENST00000325243 M0R2N6 131 aa7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 ATP9BO43861 1147 aa7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 RAD21O60216 631 aa7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 DKK1O94907 266 aa7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 LARGE2Q8N3Y3 721 aa7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 MKRN1Q9UHC7 482 aaKnown RBP7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 KCNH4Q9UQ05 1017 aa7.4□□□□□ -1.22
CBX3P1-201ENST00000325243 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 APBA3O96018 575 aa7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 NEUROD1Q13562 356 aa7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 GRIK4Q16099 956 aa7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 FOXD4L6Q3SYB3 417 aaPredicted RBP7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 ZMYM1Q5SVZ6 1142 aa7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 FOXD4L3Q6VB84 417 aaPredicted RBP7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 SIX5Q8N196 739 aa7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
CBX3P1-201ENST00000325243 PALM3A6NDB9 673 aaPredicted RBP7.38□□□□□ -1.23
CBX3P1-201ENST00000325243 UBTFP17480 764 aaKnown RBP7.38□□□□□ -1.23
CBX3P1-201ENST00000325243 TRIM28Q13263 835 aaKnown RBP7.38□□□□□ -1.23
CBX3P1-201ENST00000325243 BHMTQ93088 406 aa7.38□□□□□ -1.23
CBX3P1-201ENST00000325243 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
CBX3P1-201ENST00000325243 PRKCSHP14314 528 aaPredicted RBP7.37□□□□□ -1.23
CBX3P1-201ENST00000325243 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
CBX3P1-201ENST00000325243 DYRK3O43781 588 aa7.36□□□□□ -1.23
CBX3P1-201ENST00000325243 BTLAQ7Z6A9 289 aa7.36□□□□□ -1.23
CBX3P1-201ENST00000325243 ATAD2Q6PL18 1390 aa7.35□□□□□ -1.23
CBX3P1-201ENST00000325243 LILRB5O75023 590 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms