RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 TEX35Q5T0J7 233 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 ICE2Q659A1 982 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 CCDC191Q8NCU4 936 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 RILPL2Q969X0 211 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 DNAJC25Q9H1X3 360 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 TNMDQ9H2S6 317 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 DACT1Q9NYF0 836 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 PPLO60437 1756 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 LMTK2Q8IWU2 1503 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 A0A1W2PP64 1363 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 ZNF165P49910 485 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 ARHGAP29Q52LW3 1261 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 UBXN6Q9BZV1 441 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 TULP4Q9NRJ4 1543 aa9.4□□□□□ -0.91
RTL3-201ENST00000321110 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 GJB2P29033 226 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 TPM4P67936 248 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 RBM43Q6ZSC3 357 aaKnown RBP9.39□□□□□ -0.91
RTL3-201ENST00000321110 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
RTL3-201ENST00000321110 DNAJC5Q9H3Z4 198 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 LIMCH1Q9UPQ0 1083 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 KIAA0232Q92628 1395 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 FYB1O15117 783 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 FAM173BQ6P4H8 233 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 ADGRB1O14514 1584 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 GLI2P10070 1586 aa9.39□□□□□ -0.91
RTL3-201ENST00000321110 VPS37CA5D8V6 355 aaPredicted RBP9.38□□□□□ -0.91
RTL3-201ENST00000321110 NEMFO60524 1076 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 SEC31AO94979 1220 aaKnown RBP9.38□□□□□ -0.91
RTL3-201ENST00000321110 CPA1P15085 419 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 SRLQ86TD4 932 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 SNX14Q9Y5W7 946 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 EVC2Q86UK5 1308 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 HMOX1P09601 288 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 CTR9Q6PD62 1173 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 CCDC83Q8IWF9 413 aa9.38□□□□□ -0.91
RTL3-201ENST00000321110 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTL3-201ENST00000321110 SASH3O75995 380 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 OAS2P29728 719 aaKnown RBP9.37□□□□□ -0.91
RTL3-201ENST00000321110 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 FILIP1Q7Z7B0 1213 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 REXO1L1PQ8IX06 675 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 MRFAP1L1Q96HT8 127 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 CLSTN2Q9H4D0 955 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 C14orf93Q9H972 538 aaKnown RBP9.37□□□□□ -0.91
RTL3-201ENST00000321110 KCND1Q9NSA2 647 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 HDAC5Q9UQL6 1122 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 RRP15Q9Y3B9 282 aaKnown RBP9.37□□□□□ -0.91
RTL3-201ENST00000321110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.37□□□□□ -0.91
RTL3-201ENST00000321110 GUCY2CP25092 1073 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 IQCB1Q15051 598 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 SARM1Q6SZW1 724 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 PUS7Q96PZ0 661 aaKnown RBP9.37□□□□□ -0.91
RTL3-201ENST00000321110 ORC3Q9UBD5 711 aaPredicted RBP9.37□□□□□ -0.91
RTL3-201ENST00000321110 CFAP65Q6ZU64 1925 aaKnown RBP9.37□□□□□ -0.91
RTL3-201ENST00000321110 TSPOAP1O95153 1857 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 ELP1O95163 1332 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
RTL3-201ENST00000321110 FAM83GA6ND36 823 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 HMMRO75330 724 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 FBLN1P23142 703 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 KRT85P78386 507 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 SNW1Q13573 536 aaKnown RBP9.36□□□□□ -0.91
RTL3-201ENST00000321110 E4F1Q66K89 784 aaPredicted RBP9.36□□□□□ -0.91
RTL3-201ENST00000321110 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 TUBGCP6Q96RT7 1819 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 TTC21AQ8NDW8 1320 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 KIF2AO00139 706 aaPredicted RBP9.36□□□□□ -0.91
RTL3-201ENST00000321110 CLGNO14967 610 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 NR1I2O75469 434 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
RTL3-201ENST00000321110 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
RTL3-201ENST00000321110 DDX19AQ9NUU7 478 aaKnown RBP9.36□□□□□ -0.91
RTL3-201ENST00000321110 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 GPS2Q13227 327 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 C11orf57Q6ZUT1 292 aaPredicted RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 CDC37L1Q7L3B6 337 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 GOLGA5Q8TBA6 731 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 PPP1R13BQ96KQ4 1090 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 MYCBPQ99417 103 aaPredicted RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 TOMM22Q9NS69 142 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 HYPKQ9NX55 129 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 PLEKHG2Q9H7P9 1386 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 DHX37Q8IY37 1157 aaKnown RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 SLC26A8Q96RN1 970 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 JRKLQ9Y4A0 524 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms