RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 FNBP4Q8N3X1 1017 aaPredicted RBP10.27□□□□□ -0.77
SSBP2-201ENST00000320672 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 TAF4BQ92750 862 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 TSPYL6Q8N831 410 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 CHPF2Q9P2E5 772 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 CASQ1P31415 396 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 PRKG1Q13976 671 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 ERCC4Q92889 916 aaPredicted RBP10.27□□□□□ -0.77
SSBP2-201ENST00000320672 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
SSBP2-201ENST00000320672 SMIM23A6NLE4 172 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 TMEM67Q5HYA8 995 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 KSR1Q8IVT5 923 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 PLEKHA4Q9H4M7 779 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 SEC63Q9UGP8 760 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 TSPY2A6NKD2 308 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 ANKRD1Q15327 319 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 PRC1O43663 620 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 KLHDC4Q8TBB5 520 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 DYDC1Q8WWB3 177 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 UBXN4Q92575 508 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 RPGRQ92834 1020 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 TOP1P11387 765 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 NOP2P46087 812 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 SEC24BO95487 1268 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 HSPA2P54652 639 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 EIF6P56537 245 aaKnown RBP10.26□□□□□ -0.77
SSBP2-201ENST00000320672 C8orf58Q8NAV2 365 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 STX8Q9UNK0 236 aa10.26□□□□□ -0.77
SSBP2-201ENST00000320672 SORBS3O60504 671 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 ADCY5O95622 1261 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 FLIIQ13045 1269 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 PTPN14Q15678 1187 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 FCHSD2O94868 740 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 MTIF2P46199 727 aaKnown RBP10.25□□□□□ -0.77
SSBP2-201ENST00000320672 PPP6R1Q9UPN7 881 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 ANKRD30BQ9BXX2 1392 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 KIAA0754O94854 1291 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 ORC3Q9UBD5 711 aaPredicted RBP10.25□□□□□ -0.77
SSBP2-201ENST00000320672 PHF8Q9UPP1 1060 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 ZSCAN25Q6NSZ9 544 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 CFAP45Q9UL16 551 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 GSTTP1A0A1W2PQM5 241 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 CCDC129Q6ZRS4 1044 aa10.25□□□□□ -0.77
SSBP2-201ENST00000320672 MCM2P49736 904 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 RPAP2Q8IXW5 612 aaPredicted RBP10.24□□□□□ -0.77
SSBP2-201ENST00000320672 FEZ1Q99689 392 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 CGNQ9P2M7 1197 aaKnown RBP10.24□□□□□ -0.77
SSBP2-201ENST00000320672 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 ERLIN2O94905 339 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 HLTFQ14527 1009 aaKnown RBP eCLIP10.24□□□□□ -0.77
SSBP2-201ENST00000320672 SPECC1Q5M775 1068 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 CCDC61Q9Y6R9 512 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 SAP30BPQ9UHR5 308 aaKnown RBP10.24□□□□□ -0.77
SSBP2-201ENST00000320672 ANKRD18BA2A2Z9 1011 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 DNAJC21Q5F1R6 531 aaKnown RBP10.24□□□□□ -0.77
SSBP2-201ENST00000320672 GPATCH11Q8N954 259 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 PRXQ9BXM0 1461 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 KARSQ15046 597 aaKnown RBP10.24□□□□□ -0.77
SSBP2-201ENST00000320672 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 TMOD2Q9NZR1 351 aa10.24□□□□□ -0.77
SSBP2-201ENST00000320672 IDI1Q13907 227 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 ANKRD24Q8TF21 1146 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 DACH1Q9UI36 760 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 CTNNA3Q9UI47 895 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 NAIPQ13075 1403 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 KLF18A0A0U1RQI7 1052 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 ZYXQ15942 572 aaKnown RBP10.23□□□□□ -0.77
SSBP2-201ENST00000320672 PAIP2Q9BPZ3 127 aaKnown RBP10.23□□□□□ -0.77
SSBP2-201ENST00000320672 ZNF354CQ86Y25 554 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 ZGPATQ8N5A5 531 aaKnown RBP10.23□□□□□ -0.77
SSBP2-201ENST00000320672 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 HGSO14964 777 aaPredicted RBP10.23□□□□□ -0.77
SSBP2-201ENST00000320672 CCDC40Q4G0X9 1142 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 MRRFQ96E11 262 aaKnown RBP10.23□□□□□ -0.77
SSBP2-201ENST00000320672 ATAD2Q6PL18 1390 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
SSBP2-201ENST00000320672 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 SPA17Q15506 151 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 HEATR3Q7Z4Q2 680 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 CAPZA3Q96KX2 299 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
SSBP2-201ENST00000320672 RNASE9P60153 205 aaKnown RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 VTI1AQ96AJ9 217 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 CCDC194A0A1B0GVG4 234 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 CBFA2T2O43439 604 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 GLRX3O76003 335 aaKnown RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 OTUD7BQ6GQQ9 843 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 TMCO3Q6UWJ1 677 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 ZSCAN31Q96LW9 406 aaPredicted RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 TTC12Q9H892 705 aaPredicted RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 MAP2K1Q02750 393 aaPredicted RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 EXOC5O00471 708 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms