RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 SNRPA1P09661 255 aaKnown RBP10.24□□□□□ -0.77
TTC9C-202ENST00000316461 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
TTC9C-202ENST00000316461 PRR5LQ6MZQ0 368 aa10.24□□□□□ -0.77
TTC9C-202ENST00000316461 CNKSR1Q969H4 720 aa10.24□□□□□ -0.77
TTC9C-202ENST00000316461 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
TTC9C-202ENST00000316461 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
TTC9C-202ENST00000316461 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
TTC9C-202ENST00000316461 RRP7AQ9Y3A4 280 aaKnown RBP10.24□□□□□ -0.77
TTC9C-202ENST00000316461 CTCFP49711 727 aaPredicted RBP10.23□□□□□ -0.77
TTC9C-202ENST00000316461 VEGFBP49765 207 aa10.23□□□□□ -0.77
TTC9C-202ENST00000316461 TPTE2Q6XPS3 522 aa10.23□□□□□ -0.77
TTC9C-202ENST00000316461 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
TTC9C-202ENST00000316461 NIP7Q9Y221 180 aaKnown RBP eCLIP10.23□□□□□ -0.77
TTC9C-202ENST00000316461 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
TTC9C-202ENST00000316461 CARMIL3Q8ND23 1372 aa10.23□□□□□ -0.77
TTC9C-202ENST00000316461 COL5A3P25940 1745 aaPredicted RBP10.22□□□□□ -0.77
TTC9C-202ENST00000316461 CCDC85CA6NKD9 419 aa10.22□□□□□ -0.77
TTC9C-202ENST00000316461 MYL6BP14649 208 aa10.22□□□□□ -0.77
TTC9C-202ENST00000316461 DDX10Q13206 875 aaKnown RBP10.22□□□□□ -0.77
TTC9C-202ENST00000316461 TAF7Q15545 349 aaPredicted RBP10.22□□□□□ -0.77
TTC9C-202ENST00000316461 MASTLQ96GX5 879 aa10.22□□□□□ -0.77
TTC9C-202ENST00000316461 TAOK3Q9H2K8 898 aa10.22□□□□□ -0.77
TTC9C-202ENST00000316461 MAPK8IP3Q9UPT6 1336 aa10.22□□□□□ -0.77
TTC9C-202ENST00000316461 CNTNAP1P78357 1384 aa10.22□□□□□ -0.77
TTC9C-202ENST00000316461 TJP1Q07157 1748 aa10.21□□□□□ -0.77
TTC9C-202ENST00000316461 NFKBIEO00221 500 aa10.21□□□□□ -0.77
TTC9C-202ENST00000316461 TCERG1O14776 1098 aaKnown RBP10.21□□□□□ -0.77
TTC9C-202ENST00000316461 CAMTA2O94983 1202 aa10.21□□□□□ -0.77
TTC9C-202ENST00000316461 HSPA8P11142 646 aaKnown RBP10.21□□□□□ -0.77
TTC9C-202ENST00000316461 MLLT1Q03111 559 aaPredicted RBP10.21□□□□□ -0.77
TTC9C-202ENST00000316461 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
TTC9C-202ENST00000316461 PRPF40BQ6NWY9 871 aaKnown RBP10.21□□□□□ -0.77
TTC9C-202ENST00000316461 KIF6Q6ZMV9 814 aa10.21□□□□□ -0.77
TTC9C-202ENST00000316461 AIDAQ96BJ3 306 aa10.21□□□□□ -0.77
TTC9C-202ENST00000316461 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
TTC9C-202ENST00000316461 MYH14Q7Z406 1995 aaKnown RBP10.21□□□□□ -0.78
TTC9C-202ENST00000316461 DDNO94850 711 aaPredicted RBP10.2□□□□□ -0.78
TTC9C-202ENST00000316461 EAPPQ56P03 285 aaPredicted RBP10.2□□□□□ -0.78
TTC9C-202ENST00000316461 ZNF831Q5JPB2 1677 aa10.2□□□□□ -0.78
TTC9C-202ENST00000316461 SOGA3Q5TF21 947 aa10.2□□□□□ -0.78
TTC9C-202ENST00000316461 STYK1Q6J9G0 422 aa10.2□□□□□ -0.78
TTC9C-202ENST00000316461 PNISRQ8TF01 805 aaKnown RBP10.2□□□□□ -0.78
TTC9C-202ENST00000316461 TMX4Q9H1E5 349 aaPredicted RBP10.2□□□□□ -0.78
TTC9C-202ENST00000316461 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
TTC9C-202ENST00000316461 SCN11AQ9UI33 1791 aa10.2□□□□□ -0.78
TTC9C-202ENST00000316461 TIAM2Q8IVF5 1701 aa10.19□□□□□ -0.78
TTC9C-202ENST00000316461 SRGNP10124 158 aa10.19□□□□□ -0.78
TTC9C-202ENST00000316461 NPR1P16066 1061 aa10.19□□□□□ -0.78
TTC9C-202ENST00000316461 EIF2S2P20042 333 aaKnown RBP10.19□□□□□ -0.78
TTC9C-202ENST00000316461 CCDC93Q567U6 631 aa10.19□□□□□ -0.78
TTC9C-202ENST00000316461 LAS1LQ9Y4W2 734 aaKnown RBP10.19□□□□□ -0.78
TTC9C-202ENST00000316461 MRC1P22897 1456 aa10.18□□□□□ -0.78
TTC9C-202ENST00000316461 ZC3H4Q9UPT8 1303 aaKnown RBP10.18□□□□□ -0.78
TTC9C-202ENST00000316461 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
TTC9C-202ENST00000316461 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
TTC9C-202ENST00000316461 GPTP24298 496 aa10.18□□□□□ -0.78
TTC9C-202ENST00000316461 ALDH1B1P30837 517 aa10.18□□□□□ -0.78
TTC9C-202ENST00000316461 NEUROD2Q15784 382 aa10.18□□□□□ -0.78
TTC9C-202ENST00000316461 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
TTC9C-202ENST00000316461 RPGRQ92834 1020 aaKnown RBP10.18□□□□□ -0.78
TTC9C-202ENST00000316461 THUMPD2Q9BTF0 503 aaKnown RBP10.18□□□□□ -0.78
TTC9C-202ENST00000316461 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
TTC9C-202ENST00000316461 ZNF277Q9NRM2 450 aaPredicted RBP10.18□□□□□ -0.78
TTC9C-202ENST00000316461 TNRC18O15417 2968 aaPredicted RBP10.17□□□□□ -0.78
TTC9C-202ENST00000316461 CCDC88AQ3V6T2 1871 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 HLFQ16534 295 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 TSPYL4Q9UJ04 414 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 GJA3Q9Y6H8 435 aa10.17□□□□□ -0.78
TTC9C-202ENST00000316461 PASKQ96RG2 1323 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 IQCA1LA6NCM1 817 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 AIMP1Q12904 312 aaKnown RBP10.16□□□□□ -0.78
TTC9C-202ENST00000316461 RALBP1Q15311 655 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
TTC9C-202ENST00000316461 SYNE4Q8N205 404 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 JDP2Q8WYK2 163 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
TTC9C-202ENST00000316461 TSKSQ9UJT2 592 aa10.16□□□□□ -0.78
TTC9C-202ENST00000316461 CEMIPQ8WUJ3 1361 aa10.15□□□□□ -0.78
TTC9C-202ENST00000316461 RGS19P49795 217 aa10.15□□□□□ -0.78
TTC9C-202ENST00000316461 RIPK4P57078 832 aa10.15□□□□□ -0.78
TTC9C-202ENST00000316461 FKBP4Q02790 459 aaKnown RBP eCLIP10.15□□□□□ -0.78
TTC9C-202ENST00000316461 NFE2L2Q16236 605 aa10.15□□□□□ -0.78
TTC9C-202ENST00000316461 OLFM4Q6UX06 510 aa10.15□□□□□ -0.78
TTC9C-202ENST00000316461 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
TTC9C-202ENST00000316461 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
TTC9C-202ENST00000316461 TMEM88BA6NKF7 163 aa10.14□□□□□ -0.79
TTC9C-202ENST00000316461 ITGBL1O95965 494 aaPredicted RBP10.14□□□□□ -0.79
TTC9C-202ENST00000316461 EIF6P56537 245 aaKnown RBP10.14□□□□□ -0.79
TTC9C-202ENST00000316461 FMR1Q06787 632 aaKnown RBP eCLIP10.14□□□□□ -0.79
TTC9C-202ENST00000316461 TTLL7Q6ZT98 887 aa10.14□□□□□ -0.79
TTC9C-202ENST00000316461 PPP1R42Q7Z4L9 355 aa10.14□□□□□ -0.79
TTC9C-202ENST00000316461 ZNF428Q96B54 188 aa10.14□□□□□ -0.79
TTC9C-202ENST00000316461 RBM17Q96I25 401 aaKnown RBP10.14□□□□□ -0.79
TTC9C-202ENST00000316461 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms