RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 RNF41Q9H4P4 317 aaPredicted RBP15.82■□□□□ 0.12
RFFL-201ENST00000315249 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
RFFL-201ENST00000315249 CATIPQ7Z7H3 387 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 KRT85P78386 507 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 HAND2P61296 217 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 VTI1AQ96AJ9 217 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 CEP57L1Q8IYX8 460 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 GUCY1B3Q02153 619 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 SMARCE1Q969G3 411 aa15.82■□□□□ 0.12
RFFL-201ENST00000315249 APBA3O96018 575 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 PDE4BQ07343 736 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 GSE1Q14687 1217 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 CCDC196A0A1B0GTZ2 297 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 SERPINC1P01008 464 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 LIG1P18858 919 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
RFFL-201ENST00000315249 TBX22Q9Y458 520 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 GSTO1P78417 241 aa15.81■□□□□ 0.12
RFFL-201ENST00000315249 NF2P35240 595 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 PCDH11XQ9BZA7 1347 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 PCDH11YQ9BZA8 1340 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 JAG2Q9Y219 1238 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 TRIM27P14373 513 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 CRNKL1Q9BZJ0 848 aaKnown RBP15.8■□□□□ 0.12
RFFL-201ENST00000315249 STX8Q9UNK0 236 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
RFFL-201ENST00000315249 K7ELQ4 463 aaPredicted RBP15.8■□□□□ 0.12
RFFL-201ENST00000315249 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 DEF6Q9H4E7 631 aa15.8■□□□□ 0.12
RFFL-201ENST00000315249 RDXP35241 583 aaKnown RBP15.79■□□□□ 0.12
RFFL-201ENST00000315249 NLRP5P59047 1200 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 TSHZ3Q63HK5 1081 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 ZNF804AQ7Z570 1209 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 MTHFSDQ2M296 383 aaKnown RBP15.79■□□□□ 0.12
RFFL-201ENST00000315249 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 TRPM2O94759 1503 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
RFFL-201ENST00000315249 CYP7A1P22680 504 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 PLS1Q14651 629 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 SPATA32Q96LK8 384 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 ZNHIT6Q9NWK9 470 aaKnown RBP15.79■□□□□ 0.12
RFFL-201ENST00000315249 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
RFFL-201ENST00000315249 EHMT1Q9H9B1 1298 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 CCT2P78371 535 aaKnown RBP15.79■□□□□ 0.12
RFFL-201ENST00000315249 KAT14Q9H8E8 782 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
RFFL-201ENST00000315249 CFAP45Q9UL16 551 aa15.78■□□□□ 0.12
RFFL-201ENST00000315249 FLT4P35916 1363 aa15.78■□□□□ 0.12
RFFL-201ENST00000315249 LETM1O95202 739 aaPredicted RBP15.78■□□□□ 0.12
RFFL-201ENST00000315249 SAMM50Q9Y512 469 aa15.78■□□□□ 0.12
RFFL-201ENST00000315249 LMBR1LQ6UX01 489 aa15.78■□□□□ 0.12
RFFL-201ENST00000315249 ZGPATQ8N5A5 531 aaKnown RBP15.78■□□□□ 0.12
RFFL-201ENST00000315249 GPS2Q13227 327 aa15.78■□□□□ 0.12
RFFL-201ENST00000315249 HELBQ8NG08 1087 aaPredicted RBP15.78■□□□□ 0.12
RFFL-201ENST00000315249 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
RFFL-201ENST00000315249 GRM8O00222 908 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.12
RFFL-201ENST00000315249 DCAF5Q96JK2 942 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.12
RFFL-201ENST00000315249 HOXC9P31274 260 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 MFSD6Q6ZSS7 791 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 ATP2B3Q16720 1220 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 TMEM67Q5HYA8 995 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 C20orf194Q5TEA3 1177 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 POLKQ9UBT6 870 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 DACH1Q9UI36 760 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 SSRP1Q08945 709 aaKnown RBP15.77■□□□□ 0.12
RFFL-201ENST00000315249 RUFY1Q96T51 708 aa15.77■□□□□ 0.12
RFFL-201ENST00000315249 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
RFFL-201ENST00000315249 IP6K1Q92551 441 aa15.77■□□□□ 0.11
RFFL-201ENST00000315249 GOLGA8BA8MQT2 603 aa15.77■□□□□ 0.11
RFFL-201ENST00000315249 EVI5LQ96CN4 794 aa15.77■□□□□ 0.11
RFFL-201ENST00000315249 IRS4O14654 1257 aaPredicted RBP15.76■□□□□ 0.11
RFFL-201ENST00000315249 GOLGA8AA7E2F4 631 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 UQCRFS1P1P0C7P4 283 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
RFFL-201ENST00000315249 EYA1Q99502 592 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 TSPY3P0CV98 308 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 TSPY8P0CW00 308 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
RFFL-201ENST00000315249 MBD3O95983 291 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
RFFL-201ENST00000315249 RAB11FIP4Q86YS3 637 aa15.76■□□□□ 0.11
RFFL-201ENST00000315249 CA8P35219 290 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 CNBD1Q8NA66 436 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 NAA16Q6N069 864 aaPredicted RBP15.75■□□□□ 0.11
RFFL-201ENST00000315249 FERMT3Q86UX7 667 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 SPC24Q8NBT2 197 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 MNS1Q8NEH6 495 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 C8orf76Q96K31 380 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 YTHDC2Q9H6S0 1430 aaKnown RBP15.75■□□□□ 0.11
RFFL-201ENST00000315249 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
RFFL-201ENST00000315249 CCDC194A0A1B0GVG4 234 aa15.74■□□□□ 0.11
RFFL-201ENST00000315249 PPFIBP1Q86W92 1011 aa15.74■□□□□ 0.11
RFFL-201ENST00000315249 TSPY26PQ9H489 355 aa15.74■□□□□ 0.11
RFFL-201ENST00000315249 BAG6P46379 1132 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms