RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 PIP4K2AP48426 406 aaPredicted RBP7.76□□□□□ -1.17
PRDM2-202ENST00000311066 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 CTCFLQ8NI51 663 aaPredicted RBP7.76□□□□□ -1.17
PRDM2-202ENST00000311066 CCDC96Q2M329 555 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 LMBR1LQ6UX01 489 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 COL17A1Q9UMD9 1497 aaPredicted RBP7.76□□□□□ -1.17
PRDM2-202ENST00000311066 GOLIM4O00461 696 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 BAG6P46379 1132 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 LINS1Q8NG48 757 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 PIBF1Q8WXW3 757 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 CFAP74Q9C0B2 1584 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 ATP2B3Q16720 1220 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 LARP1BQ659C4 914 aaKnown RBP7.76□□□□□ -1.17
PRDM2-202ENST00000311066 JDP2Q8WYK2 163 aa7.76□□□□□ -1.17
PRDM2-202ENST00000311066 CEBPZQ03701 1054 aaKnown RBP7.75□□□□□ -1.17
PRDM2-202ENST00000311066 EVI5LQ96CN4 794 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 FEZ1Q99689 392 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 PLEKHG1Q9ULL1 1385 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 ABCA8O94911 1581 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 FIBPO43427 364 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 OFD1O75665 1012 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 C8orf58Q8NAV2 365 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 CCDC196A0A1B0GTZ2 297 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 GRM8O00222 908 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 ZNF213O14771 459 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 OGFOD1Q8N543 542 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 MLH3Q9UHC1 1453 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 PARD3Q8TEW0 1356 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 IL15P40933 162 aaPredicted RBP7.75□□□□□ -1.17
PRDM2-202ENST00000311066 CT47A1Q5JQC4 288 aaPredicted RBP7.75□□□□□ -1.17
PRDM2-202ENST00000311066 WDR78Q5VTH9 848 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 ZNF804AQ7Z570 1209 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 ZGPATQ8N5A5 531 aaKnown RBP7.75□□□□□ -1.17
PRDM2-202ENST00000311066 EYA3Q99504 573 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 CASTP20810 708 aaKnown RBP7.75□□□□□ -1.17
PRDM2-202ENST00000311066 C20orf194Q5TEA3 1177 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 FAM13BQ9NYF5 915 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 WDR33Q9C0J8 1336 aaKnown RBP7.75□□□□□ -1.17
PRDM2-202ENST00000311066 MBD3O95983 291 aa7.75□□□□□ -1.17
PRDM2-202ENST00000311066 PLEKHH1Q9ULM0 1364 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 IRS4O14654 1257 aaPredicted RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 K7ELQ4 463 aaPredicted RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 ZHX3Q9H4I2 956 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 HMGB1P09429 215 aaKnown RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 TNIP1Q15025 636 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 CRNKL1Q9BZJ0 848 aaKnown RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 ZC3H12CQ9C0D7 883 aaKnown RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 BMP2KQ9NSY1 1161 aaPredicted RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 CNBD1Q8NA66 436 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 RHPN1Q8TCX5 695 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 CLEC11AQ9Y240 323 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 PDE4BQ07343 736 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 SOS1Q07889 1333 aaPredicted RBP7.74□□□□□ -1.17
PRDM2-202ENST00000311066 PARP10Q53GL7 1025 aa7.74□□□□□ -1.17
PRDM2-202ENST00000311066 MBD5Q9P267 1494 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 ME1P48163 572 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 MRPL50Q8N5N7 158 aaKnown RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 NSFL1CQ9UNZ2 370 aaKnown RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 APBA3O96018 575 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 KRT85P78386 507 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 CUL5Q93034 780 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 RBM17Q96I25 401 aaKnown RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 ANKRD2Q9GZV1 360 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 MAGEC2Q9UBF1 373 aaPredicted RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 CCDC70Q6NSX1 233 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 RBM25P49756 843 aaKnown RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 MEIS3Q99687 375 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 BABAM1Q9NWV8 329 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 SLC12A7Q9Y666 1083 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 PDIA4P13667 645 aaKnown RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 ZNF790Q6PG37 636 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 RSPH6AQ9H0K4 717 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 DDX21Q9NR30 783 aaKnown RBP eCLIP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 LETM1O95202 739 aaPredicted RBP7.73□□□□□ -1.17
PRDM2-202ENST00000311066 IL13P35225 146 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 CCDC87Q9NVE4 849 aa7.73□□□□□ -1.17
PRDM2-202ENST00000311066 IFIT3O14879 490 aaKnown RBP7.72□□□□□ -1.17
PRDM2-202ENST00000311066 EFCAB6Q5THR3 1501 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 F8W031 263 aaPredicted RBP7.72□□□□□ -1.17
PRDM2-202ENST00000311066 ODF2Q5BJF6 829 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 IQSEC3Q9UPP2 1182 aaPredicted RBP7.72□□□□□ -1.17
PRDM2-202ENST00000311066 ARHGEF5Q12774 1597 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 NF2P35240 595 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 STIM1Q13586 685 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 TRPC5Q9UL62 973 aaPredicted RBP7.72□□□□□ -1.17
PRDM2-202ENST00000311066 TSPY2A6NKD2 308 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 DDX11Q96FC9 970 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 GOLGA8AA7E2F4 631 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 GOLGA8BA8MQT2 603 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 ZFYP08048 801 aaPredicted RBP7.72□□□□□ -1.17
PRDM2-202ENST00000311066 NAP1L1P55209 391 aaKnown RBP7.72□□□□□ -1.17
PRDM2-202ENST00000311066 CATIPQ7Z7H3 387 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 EHMT1Q9H9B1 1298 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 SLC52A2Q9HAB3 445 aa7.72□□□□□ -1.17
PRDM2-202ENST00000311066 KDM5DQ9BY66 1539 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms