RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
HCFC1-201ENST00000310441 OPA1O60313 960 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 TRAF1Q13077 416 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 CAMK4Q16566 473 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 CCDC110Q8TBZ0 833 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 CCDC6Q16204 474 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 MTIF2P46199 727 aaKnown RBP17.76■□□□□ 0.43
HCFC1-201ENST00000310441 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
HCFC1-201ENST00000310441 MRPS9P82933 396 aaKnown RBP17.76■□□□□ 0.43
HCFC1-201ENST00000310441 IDH1O75874 414 aaKnown RBP17.75■□□□□ 0.43
HCFC1-201ENST00000310441 UVSSAQ2YD98 709 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 SWAP70Q9UH65 585 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 MX1P20591 662 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 UBA5Q9GZZ9 404 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 FCHSD2O94868 740 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 MAP7D1Q3KQU3 841 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 KRT222Q8N1A0 295 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 ERMNQ8TAM6 284 aa17.75■□□□□ 0.43
HCFC1-201ENST00000310441 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
HCFC1-201ENST00000310441 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
HCFC1-201ENST00000310441 C9orf84Q5VXU9 1444 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
HCFC1-201ENST00000310441 MYL6BP14649 208 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 MAP4K4O95819 1239 aaPredicted RBP17.74■□□□□ 0.43
HCFC1-201ENST00000310441 ZSCAN16Q9H4T2 348 aaPredicted RBP17.74■□□□□ 0.43
HCFC1-201ENST00000310441 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 KIF14Q15058 1648 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 TMCO5BA8MYB1 307 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
HCFC1-201ENST00000310441 C16orf45Q96MC5 204 aaPredicted RBP17.74■□□□□ 0.43
HCFC1-201ENST00000310441 KIAA1107Q9UPP5 1409 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 ALDH3A1P30838 453 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 METTL24Q5JXM2 366 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 FAM177BA6PVY3 158 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 ATP2A2P16615 1042 aaKnown RBP17.73■□□□□ 0.43
HCFC1-201ENST00000310441 NOP2P46087 812 aaKnown RBP17.73■□□□□ 0.43
HCFC1-201ENST00000310441 UBE2HP62256 183 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 SYCP3Q8IZU3 236 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 GNAT3A8MTJ3 354 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 ODF2LQ9ULJ1 636 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
HCFC1-201ENST00000310441 SYNCQ9H7C4 482 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 CTAGE9A4FU28 777 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 RTEL1-TNFRSF6BF6WH68 1400 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 SLC5A1P13866 664 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 PRPF4BQ13523 1007 aaKnown RBP17.72■□□□□ 0.43
HCFC1-201ENST00000310441 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 GPATCH11Q8N954 259 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 STIM2Q9P246 746 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
HCFC1-201ENST00000310441 CUL7Q14999 1698 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 MXRA7P84157 204 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 UTP14AQ9BVJ6 771 aaKnown RBP17.71■□□□□ 0.43
HCFC1-201ENST00000310441 CNGA1P29973 690 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 CEP83Q9Y592 693 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 POGZQ7Z3K3 1410 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 PDE4BQ07343 736 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 ZNF444Q8N0Y2 327 aaPredicted RBP17.71■□□□□ 0.43
HCFC1-201ENST00000310441 KIF3CO14782 793 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 CYLC1P35663 651 aaPredicted RBP17.71■□□□□ 0.43
HCFC1-201ENST00000310441 GMNNO75496 209 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 EXOC1Q9NV70 894 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 USH1CQ9Y6N9 552 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 CBX1P83916 185 aa17.71■□□□□ 0.43
HCFC1-201ENST00000310441 ZPR1O75312 459 aa17.7■□□□□ 0.42
HCFC1-201ENST00000310441 NUTM2GQ5VZR2 741 aa17.7■□□□□ 0.42
HCFC1-201ENST00000310441 ANKIB1Q9P2G1 1089 aa17.7■□□□□ 0.42
HCFC1-201ENST00000310441 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
HCFC1-201ENST00000310441 ZNF213O14771 459 aa17.7■□□□□ 0.42
HCFC1-201ENST00000310441 USP25Q9UHP3 1055 aa17.7■□□□□ 0.42
HCFC1-201ENST00000310441 A6NNZ2 444 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 TUBB8Q3ZCM7 444 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 THEMISQ8N1K5 641 aaPredicted RBP17.69■□□□□ 0.42
HCFC1-201ENST00000310441 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 MSANTD4Q8NCY6 345 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 GTF2A1P52655 376 aaPredicted RBP17.69■□□□□ 0.42
HCFC1-201ENST00000310441 STX6O43752 255 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 PTPRCP08575 1304 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 TSGA10Q9BZW7 698 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 ZFYP08048 801 aaPredicted RBP17.69■□□□□ 0.42
HCFC1-201ENST00000310441 SPAG1Q07617 926 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 ABCF2Q9UG63 623 aa17.69■□□□□ 0.42
HCFC1-201ENST00000310441 FAM114A2Q9NRY5 505 aa17.68■□□□□ 0.42
HCFC1-201ENST00000310441 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
HCFC1-201ENST00000310441 TIAM1Q13009 1591 aa17.68■□□□□ 0.42
HCFC1-201ENST00000310441 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
HCFC1-201ENST00000310441 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.42
HCFC1-201ENST00000310441 IPO4Q8TEX9 1081 aaKnown RBP17.68■□□□□ 0.42
HCFC1-201ENST00000310441 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms