RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 NBPF6Q5VWK0 638 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 DDX54Q8TDD1 881 aaKnown RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 NBPF4Q96M43 638 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 MSH6P52701 1360 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 MED14O60244 1454 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 TMEM131LA2VDJ0 1609 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 CNTROBQ8N137 903 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 TIGD1Q96MW7 591 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 CPSF1Q10570 1443 aaKnown RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 PHAXQ9H814 394 aaKnown RBP10.97□□□□□ -0.65
XCR1-201ENST00000309285 MYOM1P52179 1685 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 LGR6Q9HBX8 967 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 NUTM2BA6NNL0 878 aaPredicted RBP10.97□□□□□ -0.65
XCR1-201ENST00000309285 NUTM2EB1AL46 878 aaPredicted RBP10.97□□□□□ -0.65
XCR1-201ENST00000309285 NUTM2AQ8IVF1 878 aaPredicted RBP10.97□□□□□ -0.65
XCR1-201ENST00000309285 IL17REQ8NFR9 667 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 CNKSR2Q8WXI2 1034 aa10.97□□□□□ -0.65
XCR1-201ENST00000309285 GTF2F1P35269 517 aaKnown RBP eCLIP10.96□□□□□ -0.65
XCR1-201ENST00000309285 RNF20Q5VTR2 975 aa10.96□□□□□ -0.65
XCR1-201ENST00000309285 ARHGEF10O15013 1369 aa10.96□□□□□ -0.65
XCR1-201ENST00000309285 ERICH2A1L162 156 aa10.96□□□□□ -0.65
XCR1-201ENST00000309285 ATP2B1P20020 1258 aa10.96□□□□□ -0.65
XCR1-201ENST00000309285 RALYLQ86SE5 291 aaKnown RBP10.96□□□□□ -0.65
XCR1-201ENST00000309285 CCDC43Q96MW1 224 aaKnown RBP10.96□□□□□ -0.65
XCR1-201ENST00000309285 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.66
XCR1-201ENST00000309285 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.66
XCR1-201ENST00000309285 SYCE3A1L190 88 aa10.96□□□□□ -0.66
XCR1-201ENST00000309285 KIF1BPQ96EK5 621 aa10.96□□□□□ -0.66
XCR1-201ENST00000309285 DNAJC2Q99543 621 aaKnown RBP10.96□□□□□ -0.66
XCR1-201ENST00000309285 RICTORQ6R327 1708 aa10.96□□□□□ -0.66
XCR1-201ENST00000309285 PDE1AP54750 535 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 PLCD4Q9BRC7 762 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
XCR1-201ENST00000309285 DYDC1Q8WWB3 177 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 LRRC7Q96NW7 1537 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 TPM1P09493 284 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 DHX37Q8IY37 1157 aaKnown RBP10.95□□□□□ -0.66
XCR1-201ENST00000309285 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
XCR1-201ENST00000309285 IKQ13123 557 aaPredicted RBP10.95□□□□□ -0.66
XCR1-201ENST00000309285 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
XCR1-201ENST00000309285 HSPA2P54652 639 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 IGSF1Q8N6C5 1336 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 AACSQ86V21 672 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 UPF3BQ9BZI7 483 aaKnown RBP10.94□□□□□ -0.66
XCR1-201ENST00000309285 SMC3Q9UQE7 1217 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
XCR1-201ENST00000309285 ATP8B2P98198 1209 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
XCR1-201ENST00000309285 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
XCR1-201ENST00000309285 CD163L1Q9NR16 1453 aa10.94□□□□□ -0.66
XCR1-201ENST00000309285 ERC1Q8IUD2 1116 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 SIRT2Q8IXJ6 389 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 IPO7O95373 1038 aaKnown RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 GTPBP4Q9BZE4 634 aaKnown RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 USP19O94966 1318 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 MYO3AQ8NEV4 1616 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 DDX17Q92841 729 aaKnown RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 KAT6BQ8WYB5 2073 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 ADAMTS13Q76LX8 1427 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 POLR3GO15318 223 aaPredicted RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 RAB11FIP3O75154 756 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 GTF2A1P52655 376 aaPredicted RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 RUFY1Q96T51 708 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 HYPKQ9NX55 129 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 SIGLEC1Q9BZZ2 1709 aa10.93□□□□□ -0.66
XCR1-201ENST00000309285 CCDC94Q9BW85 323 aaPredicted RBP10.93□□□□□ -0.66
XCR1-201ENST00000309285 CPS1P31327 1500 aa10.92□□□□□ -0.66
XCR1-201ENST00000309285 FIBPO43427 364 aa10.92□□□□□ -0.66
XCR1-201ENST00000309285 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
XCR1-201ENST00000309285 LARP1Q6PKG0 1096 aaKnown RBP10.92□□□□□ -0.66
XCR1-201ENST00000309285 ZNF526Q8TF50 670 aaPredicted RBP10.92□□□□□ -0.66
XCR1-201ENST00000309285 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
XCR1-201ENST00000309285 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
XCR1-201ENST00000309285 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
XCR1-201ENST00000309285 CCDC47Q96A33 483 aaKnown RBP10.92□□□□□ -0.66
XCR1-201ENST00000309285 SETD1BQ9UPS6 1966 aaKnown RBP10.91□□□□□ -0.66
XCR1-201ENST00000309285 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
XCR1-201ENST00000309285 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 MYD88Q99836 296 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 SPATA31D1Q6ZQQ2 1576 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 RNMTO43148 476 aaKnown RBP10.91□□□□□ -0.66
XCR1-201ENST00000309285 KCNQ3O43525 872 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 USP8P40818 1118 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 GIMAP7Q8NHV1 300 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms