RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 NIP7Q9Y221 180 aaKnown RBP eCLIP7.56□□□□□ -1.2
SCAPER-201ENST00000303521 IQGAP3Q86VI3 1631 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 MAST3O60307 1309 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 HOXC9P31274 260 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 CCDC93Q567U6 631 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 ZSCAN25Q6NSZ9 544 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 CCDC34Q96HJ3 373 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 SOS2Q07890 1332 aaPredicted RBP7.56□□□□□ -1.2
SCAPER-201ENST00000303521 DEPDC5O75140 1603 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 GSTO1P78417 241 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 CCDC27Q2M243 656 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 CCDC158Q5M9N0 1113 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 NOL8Q76FK4 1167 aaKnown RBP7.56□□□□□ -1.2
SCAPER-201ENST00000303521 ZNF804AQ7Z570 1209 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
SCAPER-201ENST00000303521 GNAI3P08754 354 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 TNFAIP1Q13829 316 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 CRB1P82279 1406 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 CCP110O43303 1012 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
SCAPER-201ENST00000303521 SSFA2P28290 1259 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 RNF20Q5VTR2 975 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 METP08581 1390 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 ANKRD18BA2A2Z9 1011 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 MVPQ14764 893 aaKnown RBP7.55□□□□□ -1.2
SCAPER-201ENST00000303521 ANKRD18AQ8IVF6 992 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 SULF1Q8IWU6 871 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 TBC1D2Q9BYX2 928 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 ACBD3Q9H3P7 528 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 TOMM22Q9NS69 142 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 NAP1L2Q9ULW6 460 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-201ENST00000303521 SPHKAPQ2M3C7 1700 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 PNPLA6Q8IY17 1366 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCAPER-201ENST00000303521 AKAP2Q9Y2D5 859 aa7.55□□□□□ -1.2
SCAPER-201ENST00000303521 WWC2Q6AWC2 1192 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 SYNE3Q6ZMZ3 975 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 MROH2AA6NES4 1674 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 ABCA6Q8N139 1617 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 RAD21O60216 631 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 ZBTB7AO95365 584 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 MYL6BP14649 208 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 TTLL6Q8N841 843 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 AATKQ6ZMQ8 1374 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 SPATA31D1Q6ZQQ2 1576 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 XRCC6P12956 609 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCAPER-201ENST00000303521 RUFY2Q8WXA3 655 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 TBC1D32Q96NH3 1257 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 SPATA31A5Q5VU36 1347 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 SPATA31A7Q8IWB4 1347 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 PRIMPOLQ96LW4 560 aa7.54□□□□□ -1.2
SCAPER-201ENST00000303521 DBF4Q9UBU7 674 aaPredicted RBP7.54□□□□□ -1.2
SCAPER-201ENST00000303521 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.54□□□□□ -1.2
SCAPER-201ENST00000303521 BCAR3O75815 825 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 TPD52L1Q16890 204 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 INO80Q9ULG1 1556 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 TERF1P54274 439 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 PABPC4Q13310 644 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 SOS1Q07889 1333 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 SLC5A1P13866 664 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 SMAP1Q8IYB5 467 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 C2orf69Q8N8R5 385 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 RNF214Q8ND24 703 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 UBTFL1P0CB47 393 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 IKQ13123 557 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 C8orf34Q49A92 452 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 ARMC9Q7Z3E5 817 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 ZNF428Q96B54 188 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 MARCH6O60337 910 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 IFIT2P09913 472 aaKnown RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 SLC15A2Q16348 729 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 DPP8Q6V1X1 898 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 ZNF526Q8TF50 670 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
SCAPER-201ENST00000303521 SLC5A4Q9NY91 659 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 CEP126Q9P2H0 1117 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 ROBO2Q9HCK4 1378 aa7.53□□□□□ -1.2
SCAPER-201ENST00000303521 MYOM2P54296 1465 aa7.52□□□□□ -1.2
SCAPER-201ENST00000303521 HLA-DOAP06340 250 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 IFIT5Q13325 482 aaKnown RBP7.52□□□□□ -1.21
SCAPER-201ENST00000303521 CABP5Q9NP86 173 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 FRMPD1Q5SYB0 1578 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 SPATA31A1Q5TZJ5 1347 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 H3BQV1 296 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 IFFO2Q5TF58 517 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 CCDC112Q8NEF3 446 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 INSRP06213 1382 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 GLRX3O76003 335 aaKnown RBP7.52□□□□□ -1.21
SCAPER-201ENST00000303521 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
SCAPER-201ENST00000303521 BABAM1Q9NWV8 329 aa7.52□□□□□ -1.21
SCAPER-201ENST00000303521 KIF1BO60333 1816 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms