RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SUCLG2Q96I99 432 aa23.84■■□□□ 1.41
HOXC4-201ENST00000303406 USP26Q9BXU7 913 aa23.84■■□□□ 1.41
HOXC4-201ENST00000303406 ANTXR1Q9H6X2 564 aa23.84■■□□□ 1.41
HOXC4-201ENST00000303406 ERC2O15083 957 aa23.84■■□□□ 1.41
HOXC4-201ENST00000303406 AFDNP55196 1824 aaKnown RBP23.83■■□□□ 1.41
HOXC4-201ENST00000303406 NUP188Q5SRE5 1749 aa23.83■■□□□ 1.41
HOXC4-201ENST00000303406 DDX54Q8TDD1 881 aaKnown RBP23.83■■□□□ 1.41
HOXC4-201ENST00000303406 KAZALD1Q96I82 304 aa23.83■■□□□ 1.41
HOXC4-201ENST00000303406 MYD88Q99836 296 aa23.83■■□□□ 1.41
HOXC4-201ENST00000303406 TTC41PQ6P2S7 1318 aa23.82■■□□□ 1.4
HOXC4-201ENST00000303406 EPB41L2O43491 1005 aaKnown RBP23.82■■□□□ 1.4
HOXC4-201ENST00000303406 VSIG10Q8N0Z9 540 aa23.81■■□□□ 1.4
HOXC4-201ENST00000303406 IL1RAPL2Q9NP60 686 aa23.81■■□□□ 1.4
HOXC4-201ENST00000303406 PHLPP1O60346 1717 aa23.8■■□□□ 1.4
HOXC4-201ENST00000303406 NFKBIBQ15653 356 aa23.8■■□□□ 1.4
HOXC4-201ENST00000303406 BICC1Q9H694 974 aaKnown RBP23.8■■□□□ 1.4
HOXC4-201ENST00000303406 TMOD3Q9NYL9 352 aa23.8■■□□□ 1.4
HOXC4-201ENST00000303406 NBPF26B4DH59 902 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 RABEP1Q15276 862 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 NBPF14Q5TI25 921 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 NBPF10Q6P3W6 841 aaKnown RBP23.79■■□□□ 1.4
HOXC4-201ENST00000303406 NBPF15Q8N660 670 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 TEX13AQ9BXU3 409 aaPredicted RBP23.79■■□□□ 1.4
HOXC4-201ENST00000303406 BCL11AQ9H165 835 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 CLASRPQ8N2M8 674 aaKnown RBP23.79■■□□□ 1.4
HOXC4-201ENST00000303406 PI4K2BQ8TCG2 481 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 NRAPQ86VF7 1730 aa23.79■■□□□ 1.4
HOXC4-201ENST00000303406 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
HOXC4-201ENST00000303406 CDCA7Q9BWT1 371 aaPredicted RBP23.78■■□□□ 1.4
HOXC4-201ENST00000303406 ITGB4P16144 1822 aa23.77■■□□□ 1.4
HOXC4-201ENST00000303406 RABL6Q3YEC7 729 aaPredicted RBP23.77■■□□□ 1.4
HOXC4-201ENST00000303406 ESYT1Q9BSJ8 1104 aa23.77■■□□□ 1.4
HOXC4-201ENST00000303406 CHMLP26374 656 aa23.76■■□□□ 1.39
HOXC4-201ENST00000303406 NUTM1Q86Y26 1132 aa23.76■■□□□ 1.39
HOXC4-201ENST00000303406 TSHZ3Q63HK5 1081 aa23.75■■□□□ 1.39
HOXC4-201ENST00000303406 AK9Q5TCS8 1911 aa23.75■■□□□ 1.39
HOXC4-201ENST00000303406 TRIM6-TRIM34B2RNG4 842 aa23.74■■□□□ 1.39
HOXC4-201ENST00000303406 GLRX3O76003 335 aaKnown RBP23.74■■□□□ 1.39
HOXC4-201ENST00000303406 G3BP1Q13283 466 aaKnown RBP eCLIP23.74■■□□□ 1.39
HOXC4-201ENST00000303406 IL27Q8NEV9 243 aa23.74■■□□□ 1.39
HOXC4-201ENST00000303406 GPATCH3Q96I76 525 aa23.74■■□□□ 1.39
HOXC4-201ENST00000303406 THRAP3Q9Y2W1 955 aaKnown RBP23.74■■□□□ 1.39
HOXC4-201ENST00000303406 CASP7P55210 303 aa23.74■■□□□ 1.39
HOXC4-201ENST00000303406 SLKQ9H2G2 1235 aaPredicted RBP23.74■■□□□ 1.39
HOXC4-201ENST00000303406 COPRSQ9NQ92 184 aa23.74■■□□□ 1.39
HOXC4-201ENST00000303406 CHMP5Q9NZZ3 219 aa23.74■■□□□ 1.39
HOXC4-201ENST00000303406 CNTROBQ8N137 903 aa23.73■■□□□ 1.39
HOXC4-201ENST00000303406 IL17RAQ96F46 866 aa23.73■■□□□ 1.39
HOXC4-201ENST00000303406 TJP1Q07157 1748 aa23.72■■□□□ 1.39
HOXC4-201ENST00000303406 NWD2Q9ULI1 1742 aa23.72■■□□□ 1.39
HOXC4-201ENST00000303406 BCL9O00512 1426 aa23.72■■□□□ 1.39
HOXC4-201ENST00000303406 H7C1W4 665 aa23.72■■□□□ 1.39
HOXC4-201ENST00000303406 K7ELQ4 463 aaPredicted RBP23.72■■□□□ 1.39
HOXC4-201ENST00000303406 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
HOXC4-201ENST00000303406 PIGBQ92521 554 aa23.72■■□□□ 1.39
HOXC4-201ENST00000303406 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
HOXC4-201ENST00000303406 PA2G4Q9UQ80 394 aaKnown RBP23.72■■□□□ 1.39
HOXC4-201ENST00000303406 EXOC5O00471 708 aa23.71■■□□□ 1.39
HOXC4-201ENST00000303406 ECHDC1Q9NTX5 307 aa23.71■■□□□ 1.39
HOXC4-201ENST00000303406 CIZ1Q9ULV3 898 aaPredicted RBP23.71■■□□□ 1.39
HOXC4-201ENST00000303406 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
HOXC4-201ENST00000303406 A1BGP04217 495 aa23.7■■□□□ 1.38
HOXC4-201ENST00000303406 DDIT3P35638 169 aa23.7■■□□□ 1.38
HOXC4-201ENST00000303406 A0A087WZG4 1122 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 SASH1O94885 1247 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 IFIT2P09913 472 aaKnown RBP23.69■■□□□ 1.38
HOXC4-201ENST00000303406 MCCP23508 829 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 RFX5P48382 616 aaPredicted RBP23.69■■□□□ 1.38
HOXC4-201ENST00000303406 ANAPC15P60006 121 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 EPHA10Q5JZY3 1008 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 CCDC191Q8NCU4 936 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 ATG3Q9NT62 314 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 CWC25Q9NXE8 425 aaPredicted RBP23.69■■□□□ 1.38
HOXC4-201ENST00000303406 TTLL7Q6ZT98 887 aa23.69■■□□□ 1.38
HOXC4-201ENST00000303406 UBE3BQ7Z3V4 1068 aa23.68■■□□□ 1.38
HOXC4-201ENST00000303406 STARD3NLO95772 234 aa23.67■■□□□ 1.38
HOXC4-201ENST00000303406 TRIM28Q13263 835 aaKnown RBP23.67■■□□□ 1.38
HOXC4-201ENST00000303406 SPATA31A1Q5TZJ5 1347 aa23.67■■□□□ 1.38
HOXC4-201ENST00000303406 ATP5J2-PTCD1G3V325 749 aa23.66■■□□□ 1.38
HOXC4-201ENST00000303406 TOM1O60784 492 aa23.66■■□□□ 1.38
HOXC4-201ENST00000303406 AACSQ86V21 672 aa23.66■■□□□ 1.38
HOXC4-201ENST00000303406 ASAP1Q9ULH1 1129 aa23.66■■□□□ 1.38
HOXC4-201ENST00000303406 RBM42Q9BTD8 480 aaKnown RBP23.65■■□□□ 1.38
HOXC4-201ENST00000303406 ISCA1Q9BUE6 129 aa23.65■■□□□ 1.38
HOXC4-201ENST00000303406 ST18O60284 1047 aa23.64■■□□□ 1.38
HOXC4-201ENST00000303406 PTPN12Q05209 780 aaKnown RBP23.64■■□□□ 1.38
HOXC4-201ENST00000303406 SLIT2O94813 1529 aa23.64■■□□□ 1.37
HOXC4-201ENST00000303406 DOT1LQ8TEK3 1739 aa23.64■■□□□ 1.37
HOXC4-201ENST00000303406 FRAT2O75474 233 aaPredicted RBP23.64■■□□□ 1.37
HOXC4-201ENST00000303406 CD2BP2O95400 341 aaKnown RBP23.64■■□□□ 1.37
HOXC4-201ENST00000303406 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.37
HOXC4-201ENST00000303406 EAF2Q96CJ1 260 aaPredicted RBP23.64■■□□□ 1.37
HOXC4-201ENST00000303406 SGSM2O43147 1006 aa23.63■■□□□ 1.37
HOXC4-201ENST00000303406 FOXO4P98177 505 aa23.63■■□□□ 1.37
HOXC4-201ENST00000303406 EVI5LQ96CN4 794 aa23.63■■□□□ 1.37
HOXC4-201ENST00000303406 CICQ96RK0 1608 aaPredicted RBP23.62■■□□□ 1.37
HOXC4-201ENST00000303406 TCIRG1Q13488 830 aa23.62■■□□□ 1.37
HOXC4-201ENST00000303406 RUFY2Q8WXA3 655 aa23.62■■□□□ 1.37
HOXC4-201ENST00000303406 HIP1O00291 1037 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms