RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 TPTE2Q6XPS3 522 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 ANKRD13DQ6ZTN6 518 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 SIRT1Q96EB6 747 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 SCAF11Q99590 1463 aaKnown RBP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 PIK3R4Q99570 1358 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 GOLIM4O00461 696 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 CETN2P41208 172 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 PPP4R3BQ5MIZ7 849 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 TRMT1LQ7Z2T5 733 aaKnown RBP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 SLFN5Q08AF3 891 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 EYA3Q99504 573 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 PICALMQ13492 652 aa8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 DZIP3Q86Y13 1208 aaKnown RBP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 ZNF397Q8NF99 534 aaPredicted RBP8.06□□□□□ -1.12
GAPVD1-202ENST00000297933 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 JAKMIP3Q5VZ66 844 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 JARID2Q92833 1246 aaPredicted RBP8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 ZC3H12CQ9C0D7 883 aaKnown RBP8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 A2MP01023 1474 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 PDIA4P13667 645 aaKnown RBP8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 MFSD6Q6ZSS7 791 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 FERMT2Q96AC1 680 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 RBM17Q96I25 401 aaKnown RBP8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 GJA3Q9Y6H8 435 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 UHRF1BP1Q6BDS2 1440 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 ZNF518AQ6AHZ1 1483 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 TSPY3P0CV98 308 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 TSPY8P0CW00 308 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 PLS1Q14651 629 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 BTG4Q9NY30 223 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 KIF20AO95235 890 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 NFKBIBQ15653 356 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 BEGAINQ9BUH8 593 aa8.05□□□□□ -1.12
GAPVD1-202ENST00000297933 SMTNL1A8MU46 457 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 B4DLN1 442 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 ECM2O94769 699 aaPredicted RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 MRPL12P52815 198 aaKnown RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 TRAF1Q13077 416 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 AKAP4Q5JQC9 854 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 RIMBP2O15034 1052 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 TMEM67Q5HYA8 995 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 ZNF771Q7L3S4 317 aaPredicted RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 CKAP2LQ8IYA6 745 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 EVI5LQ96CN4 794 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 FGFR1OPO95684 399 aaKnown RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 ANAPC15P60006 121 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 CCDC178Q5BJE1 867 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 SPC24Q8NBT2 197 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 PLCH2O75038 1416 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 ANKRD36BQ8N2N9 1353 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 FANCIQ9NVI1 1328 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 GNPATO15228 680 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 CYP7A1P22680 504 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 GBP2P32456 591 aaPredicted RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 TNNI2P48788 182 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 FKBP15Q5T1M5 1219 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 CCDC83Q8IWF9 413 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 SSH1Q8WYL5 1049 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 TAF4BQ92750 862 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 CALML4Q96GE6 196 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 STXBP4Q6ZWJ1 553 aa8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 CDCA7Q9BWT1 371 aaPredicted RBP8.04□□□□□ -1.12
GAPVD1-202ENST00000297933 GOLGA6L10A6NI86 522 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 TRAK2O60296 914 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 XAGE3Q8WTP9 111 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 BICRAQ9NZM4 1560 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 KIAA1328Q86T90 577 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 BICD1Q96G01 975 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 UPF3BQ9BZI7 483 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 NUP62CLQ9H1M0 184 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 PCDH11XQ9BZA7 1347 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 PCDH11YQ9BZA8 1340 aa8.03□□□□□ -1.12
GAPVD1-202ENST00000297933 SYCP3Q8IZU3 236 aa8.02□□□□□ -1.12
GAPVD1-202ENST00000297933 CCNL1Q9UK58 526 aaPredicted RBP8.02□□□□□ -1.12
GAPVD1-202ENST00000297933 IQSEC3Q9UPP2 1182 aaPredicted RBP8.02□□□□□ -1.12
GAPVD1-202ENST00000297933 FAM83GA6ND36 823 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 COPS6Q7L5N1 327 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 CHPF2Q9P2E5 772 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 STX8Q9UNK0 236 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 NSFL1CQ9UNZ2 370 aaKnown RBP8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 RAPGEF6Q8TEU7 1601 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 ANXA1P04083 346 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 BAG6P46379 1132 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 CETN1Q12798 172 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 ENOX2Q16206 610 aaKnown RBP8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 NAA16Q6N069 864 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 ECHDC1Q9NTX5 307 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms