RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 LARP1Q6PKG0 1096 aaKnown RBP12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 FTOQ9C0B1 505 aaKnown RBP eCLIP12.22□□□□□ -0.45
ARHGEF3-201ENST00000296315 SIL1Q9H173 461 aa12.22□□□□□ -0.45
ARHGEF3-201ENST00000296315 EPC1Q9H2F5 836 aa12.22□□□□□ -0.45
ARHGEF3-201ENST00000296315 PAXBP1Q9Y5B6 917 aa12.22□□□□□ -0.45
ARHGEF3-201ENST00000296315 RAD50Q92878 1312 aa12.22□□□□□ -0.45
ARHGEF3-201ENST00000296315 CCDC34Q96HJ3 373 aa12.22□□□□□ -0.45
ARHGEF3-201ENST00000296315 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.45
ARHGEF3-201ENST00000296315 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
ARHGEF3-201ENST00000296315 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.45
ARHGEF3-201ENST00000296315 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.46
ARHGEF3-201ENST00000296315 SGSM2O43147 1006 aa12.21□□□□□ -0.46
ARHGEF3-201ENST00000296315 LRRN4CLQ8ND94 238 aa12.21□□□□□ -0.46
ARHGEF3-201ENST00000296315 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.46
ARHGEF3-201ENST00000296315 FUCA2Q9BTY2 467 aa12.21□□□□□ -0.46
ARHGEF3-201ENST00000296315 ZSWIM4Q9H7M6 989 aa12.21□□□□□ -0.46
ARHGEF3-201ENST00000296315 JAK2O60674 1132 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 ARHGAP29Q52LW3 1261 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 PA2G4Q9UQ80 394 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 PTPRCP08575 1304 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 PIK3R4Q99570 1358 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 GYS2P54840 703 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 AEBP2Q6ZN18 517 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 MNS1Q8NEH6 495 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 C10orf67Q8IYJ2 551 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 SDF4Q9BRK5 362 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
ARHGEF3-201ENST00000296315 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 URI1O94763 535 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 SEC31AO94979 1220 aaKnown RBP12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 SLU7O95391 586 aaKnown RBP12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 STK11IPQ8N1F8 1099 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 AOPEPQ8N6M6 819 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 FAM135BQ49AJ0 1406 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 CHL1O00533 1208 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 BOLA2Q9H3K6 86 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 OSBPL3Q9H4L5 887 aa12.19□□□□□ -0.46
ARHGEF3-201ENST00000296315 LRRC8AQ8IWT6 810 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 RUFY2Q8WXA3 655 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 DNAI1Q9UI46 699 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 BLOC1S2Q6QNY1 142 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 LSG1Q9H089 658 aaKnown RBP12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 RBM8AQ9Y5S9 174 aaKnown RBP12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 NDUFB9Q9Y6M9 179 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 ME1P48163 572 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 RBM6P78332 1123 aaKnown RBP12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 HDGFL1Q5TGJ6 251 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 CCDC73Q6ZRK6 1079 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 LEO1Q8WVC0 666 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
ARHGEF3-201ENST00000296315 AMPHP49418 695 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 UBXN4Q92575 508 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 KINO60870 393 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 BRF1Q92994 677 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 MYOM2P54296 1465 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 SF3A1Q15459 793 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 AACSQ86V21 672 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 TTC14Q96N46 770 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
ARHGEF3-201ENST00000296315 SOS1Q07889 1333 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 SCAND2PQ9GZW5 306 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 PDIA4P13667 645 aaKnown RBP12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 TMCO3Q6UWJ1 677 aa12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
ARHGEF3-201ENST00000296315 EDC3Q96F86 508 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms