RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 DNA2P51530 1060 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 COG7P83436 770 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC170Q8IYT3 715 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC92Q53HC0 331 aaPredicted RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 SSFA2P28290 1259 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 ST20-MTHFSA0A0A6YYL1 179 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 NLRP5P59047 1200 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 FAM160A1Q05DH4 1040 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 PLEKHH2Q8IVE3 1493 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 PSMC4P43686 418 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 APBB1IPQ7Z5R6 666 aaPredicted RBP12.61□□□□□ -0.39
FYCO1-201ENST00000296137 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
FYCO1-201ENST00000296137 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 RASAL2Q9UJF2 1139 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 ERCC3P19447 782 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 RIPK4P57078 832 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 FKBP5Q13451 457 aaPredicted RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 TOP2AP11388 1531 aaKnown RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 GOLGA6CA6NDK9 693 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 GOLGA6DP0CG33 693 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 GOLGA6AQ9NYA3 693 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 VPS37DQ86XT2 251 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 LRRD1A4D1F6 860 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 NEDD9Q14511 834 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 USP6NLQ92738 828 aa12.6□□□□□ -0.39
FYCO1-201ENST00000296137 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
FYCO1-201ENST00000296137 TPD52P55327 224 aaPredicted RBP12.59□□□□□ -0.39
FYCO1-201ENST00000296137 IQCGQ9H095 443 aaKnown RBP12.59□□□□□ -0.39
FYCO1-201ENST00000296137 WASHC2CQ9Y4E1 1318 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 SOGA1O94964 1423 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 KDM4AO75164 1064 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
FYCO1-201ENST00000296137 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 SELENOSQ9BQE4 189 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 MUM1Q2TAK8 710 aa12.59□□□□□ -0.39
FYCO1-201ENST00000296137 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.39
FYCO1-201ENST00000296137 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.39
FYCO1-201ENST00000296137 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.39
FYCO1-201ENST00000296137 ALDH3A1P30838 453 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 RAB3IPQ96QF0 476 aaPredicted RBP12.58□□□□□ -0.4
FYCO1-201ENST00000296137 UBTFL1P0CB47 393 aaPredicted RBP12.58□□□□□ -0.4
FYCO1-201ENST00000296137 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 CUX1P39880 1505 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 FLIIQ13045 1269 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC65Q8IXS2 484 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 GSDMBQ8TAX9 411 aa12.58□□□□□ -0.4
FYCO1-201ENST00000296137 MAP3K7CLP57077 242 aa12.57□□□□□ -0.4
FYCO1-201ENST00000296137 SNCBQ16143 134 aa12.57□□□□□ -0.4
FYCO1-201ENST00000296137 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
FYCO1-201ENST00000296137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
FYCO1-201ENST00000296137 VAV2P52735 878 aa12.57□□□□□ -0.4
FYCO1-201ENST00000296137 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
FYCO1-201ENST00000296137 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.57□□□□□ -0.4
FYCO1-201ENST00000296137 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
FYCO1-201ENST00000296137 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
FYCO1-201ENST00000296137 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
FYCO1-201ENST00000296137 FRMD3A2A2Y4 597 aa12.57□□□□□ -0.4
FYCO1-201ENST00000296137 N4BP2L2Q92802 583 aaPredicted RBP12.56□□□□□ -0.4
FYCO1-201ENST00000296137 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
FYCO1-201ENST00000296137 PRC1O43663 620 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
FYCO1-201ENST00000296137 UBASH3AP57075 661 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 PRPF4BQ13523 1007 aaKnown RBP12.56□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC96Q2M329 555 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 WIZO95785 1651 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 GNAI1P63096 354 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 KRT32Q14532 448 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 LRRC45Q96CN5 670 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 CHMP2AO43633 222 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 SATB2Q9UPW6 733 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
FYCO1-201ENST00000296137 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
FYCO1-201ENST00000296137 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
FYCO1-201ENST00000296137 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ANO6Q4KMQ2 910 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 TBC1D31Q96DN5 1066 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms