RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HSP90B2PQ58FF3 399 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 JARID2Q92833 1246 aaPredicted RBP15.74■□□□□ 0.11
HPS3-201ENST00000296051 NBPF6Q5VWK0 638 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
HPS3-201ENST00000296051 ZSCAN31Q96LW9 406 aaPredicted RBP15.73■□□□□ 0.11
HPS3-201ENST00000296051 NBPF4Q96M43 638 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 BTG4Q9NY30 223 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 TMEM63CQ9P1W3 806 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 UBE2HP62256 183 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 USP19O94966 1318 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 FSD2A1L4K1 749 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 HIP1O00291 1037 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 FLIIQ13045 1269 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 CRACR2BQ8N4Y2 399 aaPredicted RBP15.73■□□□□ 0.11
HPS3-201ENST00000296051 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 CEP57L1Q8IYX8 460 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
HPS3-201ENST00000296051 RIMS2Q9UQ26 1411 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 BIN1O00499 593 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 MPHOSPH10O00566 681 aaKnown RBP15.72■□□□□ 0.11
HPS3-201ENST00000296051 IBSPP21815 317 aaPredicted RBP15.72■□□□□ 0.11
HPS3-201ENST00000296051 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
HPS3-201ENST00000296051 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
HPS3-201ENST00000296051 DCTPP1Q9H773 170 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
HPS3-201ENST00000296051 ISM2Q6H9L7 571 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 UBXN4Q92575 508 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 PRIMPOLQ96LW4 560 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 LMBRD1Q9NUN5 540 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 ZNF518AQ6AHZ1 1483 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 GCP02774 474 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 NBPF14Q5TI25 921 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
HPS3-201ENST00000296051 DDX46Q7L014 1031 aaKnown RBP15.72■□□□□ 0.11
HPS3-201ENST00000296051 UHRF1BP1Q6BDS2 1440 aa15.71■□□□□ 0.11
HPS3-201ENST00000296051 ZSCAN22P10073 491 aaPredicted RBP15.71■□□□□ 0.11
HPS3-201ENST00000296051 MAGI3Q5TCQ9 1506 aa15.71■□□□□ 0.11
HPS3-201ENST00000296051 GLRX3O76003 335 aaKnown RBP15.71■□□□□ 0.11
HPS3-201ENST00000296051 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
HPS3-201ENST00000296051 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
HPS3-201ENST00000296051 TRIM35Q9UPQ4 493 aa15.71■□□□□ 0.11
HPS3-201ENST00000296051 IL16Q14005 1332 aa15.71■□□□□ 0.1
HPS3-201ENST00000296051 ANKRD1Q15327 319 aa15.71■□□□□ 0.1
HPS3-201ENST00000296051 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.1
HPS3-201ENST00000296051 DZIP1Q86YF9 867 aaKnown RBP15.71■□□□□ 0.1
HPS3-201ENST00000296051 ZNF396Q96N95 335 aaPredicted RBP15.71■□□□□ 0.1
HPS3-201ENST00000296051 PIP4K2AP48426 406 aaPredicted RBP15.7■□□□□ 0.1
HPS3-201ENST00000296051 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 GADD45BO75293 160 aaPredicted RBP15.7■□□□□ 0.1
HPS3-201ENST00000296051 USP5P45974 858 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 LDHAL6AQ6ZMR3 332 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 ARHGAP45Q92619 1136 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 URI1O94763 535 aaPredicted RBP15.7■□□□□ 0.1
HPS3-201ENST00000296051 PTGS1P23219 599 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 UBE3BQ7Z3V4 1068 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
HPS3-201ENST00000296051 CCT2P78371 535 aaKnown RBP15.7■□□□□ 0.1
HPS3-201ENST00000296051 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 POLR3DP05423 398 aaPredicted RBP15.69■□□□□ 0.1
HPS3-201ENST00000296051 CEP85Q6P2H3 762 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 ZFP91Q96JP5 570 aaPredicted RBP15.69■□□□□ 0.1
HPS3-201ENST00000296051 SCAND2PQ9GZW5 306 aaPredicted RBP15.69■□□□□ 0.1
HPS3-201ENST00000296051 DACT1Q9NYF0 836 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 UBAC1Q9BSL1 405 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 IPO7O95373 1038 aaKnown RBP15.69■□□□□ 0.1
HPS3-201ENST00000296051 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
HPS3-201ENST00000296051 IL2RBP14784 551 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 CFAP100Q494V2 611 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 TBX22Q9Y458 520 aa15.69■□□□□ 0.1
HPS3-201ENST00000296051 ANKRD18BA2A2Z9 1011 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 ANKRD20A12PQ8NF67 263 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 LRRC2Q9BYS8 371 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 POLKQ9UBT6 870 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 ADAMTS12P58397 1594 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 SFPQP23246 707 aaKnown RBP eCLIP15.68■□□□□ 0.1
HPS3-201ENST00000296051 ANO6Q4KMQ2 910 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 DDX17Q92841 729 aaKnown RBP15.68■□□□□ 0.1
HPS3-201ENST00000296051 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
HPS3-201ENST00000296051 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
HPS3-201ENST00000296051 HOOK1Q9UJC3 728 aaKnown RBP15.68■□□□□ 0.1
HPS3-201ENST00000296051 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 SETDB2Q96T68 719 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 AKAP2Q9Y2D5 859 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
HPS3-201ENST00000296051 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 LUZP1Q86V48 1076 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 CCDC94Q9BW85 323 aaPredicted RBP15.67■□□□□ 0.1
HPS3-201ENST00000296051 DNAJC25Q9H1X3 360 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 ZNF445P59923 1031 aa15.67■□□□□ 0.1
HPS3-201ENST00000296051 UVSSAQ2YD98 709 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms