RNA–Protein interactions for RNA: ENST00000295461.9

NIPAL1-201, Transcript of NIPA like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL1, Length 5,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-201ENST00000295461 ATP2B1P20020 1258 aa13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 GUCY1B3Q02153 619 aa13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 AK2P54819 239 aa13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 STK38Q15208 465 aa13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 VPS37DQ86XT2 251 aa13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.2
NIPAL1-201ENST00000295461 PKP1Q13835 747 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 IFNL2Q8IZJ0 200 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 NFATC2IPQ8NCF5 419 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 CHAMP1Q96JM3 812 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 RNMTO43148 476 aaKnown RBP13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 CKAP2LQ8IYA6 745 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 TSPOAP1O95153 1857 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
NIPAL1-201ENST00000295461 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 GOLIM4O00461 696 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 ZSCAN22P10073 491 aaPredicted RBP13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 UQCRHP07919 91 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 LRRC2Q9BYS8 371 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 TBC1D2BQ9UPU7 963 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 IFIT1P09914 478 aaKnown RBP13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 CCT2P78371 535 aaKnown RBP13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 SNRKQ9NRH2 765 aa13.76□□□□□ -0.21
NIPAL1-201ENST00000295461 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 KLHDC4Q8TBB5 520 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 ARHGAP31Q2M1Z3 1444 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 GIMAP6Q6P9H5 292 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 ERICH2A1L162 156 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 HCLS1P14317 486 aaPredicted RBP13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
NIPAL1-201ENST00000295461 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 PALD1Q9ULE6 856 aa13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 CLCN1P35523 988 aa13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 TPD52L1Q16890 204 aaPredicted RBP13.74□□□□□ -0.21
NIPAL1-201ENST00000295461 PES1O00541 588 aaKnown RBP13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 DNM1Q05193 864 aaKnown RBP13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 LMTK2Q8IWU2 1503 aa13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 SMC2O95347 1197 aa13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 ZNF830Q96NB3 372 aaPredicted RBP13.73□□□□□ -0.21
NIPAL1-201ENST00000295461 EIF4A1P60842 406 aaKnown RBP13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 RAB11FIP4Q86YS3 637 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 GPTP24298 496 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 DHX16O60231 1041 aaKnown RBP13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 METTL24Q5JXM2 366 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 UBE2HP62256 183 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 NAT10Q9H0A0 1025 aaKnown RBP13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 CDK12Q9NYV4 1490 aaPredicted RBP13.72□□□□□ -0.21
NIPAL1-201ENST00000295461 ADCY5O95622 1261 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 HAND2P61296 217 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 F13A1P00488 732 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 TPM3P06753 285 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 USP6P35125 1406 aa13.71□□□□□ -0.21
NIPAL1-201ENST00000295461 MTMR7Q9Y216 660 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 GAS2L3Q86XJ1 694 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 CCAR2Q8N163 923 aaKnown RBP13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 BRF1Q92994 677 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.22
NIPAL1-201ENST00000295461 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 SCAND2PQ9GZW5 306 aaPredicted RBP13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 KIDINS220Q9ULH0 1771 aa13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 IMMTQ16891 758 aaKnown RBP13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 CWC25Q9NXE8 425 aaPredicted RBP13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 TFCP2Q12800 502 aa13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
NIPAL1-201ENST00000295461 SGSM2O43147 1006 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms