RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MFAP1P55081 439 aaKnown RBP11.33□□□□□ -0.6
PDPN-201ENST00000294489 DDB1Q16531 1140 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 MARCH10Q8NA82 808 aaPredicted RBP11.33□□□□□ -0.6
PDPN-201ENST00000294489 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 SALL3Q9BXA9 1300 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 MYL6BP14649 208 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 HDAC5Q9UQL6 1122 aa11.33□□□□□ -0.6
PDPN-201ENST00000294489 C22orf23Q9BZE7 217 aa11.32□□□□□ -0.6
PDPN-201ENST00000294489 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
PDPN-201ENST00000294489 GRM8O00222 908 aa11.32□□□□□ -0.6
PDPN-201ENST00000294489 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
PDPN-201ENST00000294489 OSBPL3Q9H4L5 887 aa11.32□□□□□ -0.6
PDPN-201ENST00000294489 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
PDPN-201ENST00000294489 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
PDPN-201ENST00000294489 KAZALD1Q96I82 304 aa11.31□□□□□ -0.6
PDPN-201ENST00000294489 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
PDPN-201ENST00000294489 APBB1O00213 710 aa11.31□□□□□ -0.6
PDPN-201ENST00000294489 GCKRQ14397 625 aa11.31□□□□□ -0.6
PDPN-201ENST00000294489 ATRNO75882 1429 aa11.31□□□□□ -0.6
PDPN-201ENST00000294489 AIMP1Q12904 312 aaKnown RBP11.31□□□□□ -0.6
PDPN-201ENST00000294489 NUP98P52948 1817 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
PDPN-201ENST00000294489 RAB11FIP3O75154 756 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 A1BGP04217 495 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 CASP7P55210 303 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 PPP1R42Q7Z4L9 355 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 NBR1Q14596 966 aa11.3□□□□□ -0.6
PDPN-201ENST00000294489 CDC45O75419 566 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 CYP19A1P11511 503 aaPredicted RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 TTC22Q5TAA0 569 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 NGLY1Q96IV0 654 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 BCORQ6W2J9 1755 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 LY75O60449 1722 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 BTAF1O14981 1849 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 HSPA1LP34931 641 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 MYD88Q99836 296 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 SUCLG2Q96I99 432 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
PDPN-201ENST00000294489 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
PDPN-201ENST00000294489 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
PDPN-201ENST00000294489 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
PDPN-201ENST00000294489 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
PDPN-201ENST00000294489 EXOC6BQ9Y2D4 811 aa11.28□□□□□ -0.6
PDPN-201ENST00000294489 STARD3NLO95772 234 aa11.28□□□□□ -0.6
PDPN-201ENST00000294489 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
PDPN-201ENST00000294489 TRIM28Q13263 835 aaKnown RBP11.28□□□□□ -0.6
PDPN-201ENST00000294489 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
PDPN-201ENST00000294489 MYH14Q7Z406 1995 aaKnown RBP11.28□□□□□ -0.6
PDPN-201ENST00000294489 AOX1Q06278 1338 aa11.28□□□□□ -0.6
PDPN-201ENST00000294489 H7C1W4 665 aa11.27□□□□□ -0.6
PDPN-201ENST00000294489 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.6
PDPN-201ENST00000294489 USP21Q9UK80 565 aa11.27□□□□□ -0.6
PDPN-201ENST00000294489 SRGAP3O43295 1099 aa11.27□□□□□ -0.61
PDPN-201ENST00000294489 ISCA1Q9BUE6 129 aa11.27□□□□□ -0.61
PDPN-201ENST00000294489 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
PDPN-201ENST00000294489 CASC1Q6TDU7 716 aa11.26□□□□□ -0.61
PDPN-201ENST00000294489 OTUD7AQ8TE49 926 aaPredicted RBP11.26□□□□□ -0.61
PDPN-201ENST00000294489 USP42Q9H9J4 1324 aaKnown RBP11.26□□□□□ -0.61
PDPN-201ENST00000294489 HSP90AB4PQ58FF6 505 aa11.26□□□□□ -0.61
PDPN-201ENST00000294489 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
PDPN-201ENST00000294489 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
PDPN-201ENST00000294489 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
PDPN-201ENST00000294489 CCDC191Q8NCU4 936 aa11.26□□□□□ -0.61
PDPN-201ENST00000294489 LAMB2P55268 1798 aa11.25□□□□□ -0.61
PDPN-201ENST00000294489 MYH3P11055 1940 aa11.25□□□□□ -0.61
PDPN-201ENST00000294489 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
PDPN-201ENST00000294489 PDE1AP54750 535 aa11.25□□□□□ -0.61
PDPN-201ENST00000294489 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 RFX5P48382 616 aaPredicted RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 EPHA10Q5JZY3 1008 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 RHPN1Q8TCX5 695 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 MAP3K15Q6ZN16 1313 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 SURF6O75683 361 aaKnown RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 SDSP20132 328 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 INTS5Q6P9B9 1019 aaKnown RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 TBC1D2Q9BYX2 928 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 PALLDQ8WX93 1383 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 ERVV-1B6SEH8 477 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 FOXO4P98177 505 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 SCN7AQ01118 1682 aa11.24□□□□□ -0.61
PDPN-201ENST00000294489 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 CWC25Q9NXE8 425 aaPredicted RBP11.24□□□□□ -0.61
PDPN-201ENST00000294489 AFF2P51816 1311 aa11.23□□□□□ -0.61
PDPN-201ENST00000294489 MX1P20591 662 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms