RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 SUCLG2Q96I99 432 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 MYD88Q99836 296 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 SURF6O75683 361 aaKnown RBP12.56□□□□□ -0.4
C9orf43-201ENST00000288462 HSP90AB4PQ58FF6 505 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 CDCA7Q9BWT1 371 aaPredicted RBP12.56□□□□□ -0.4
C9orf43-201ENST00000288462 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
C9orf43-201ENST00000288462 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
C9orf43-201ENST00000288462 PIGBQ92521 554 aa12.55□□□□□ -0.4
C9orf43-201ENST00000288462 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
C9orf43-201ENST00000288462 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
C9orf43-201ENST00000288462 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
C9orf43-201ENST00000288462 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
C9orf43-201ENST00000288462 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
C9orf43-201ENST00000288462 BECN1Q14457 450 aa12.55□□□□□ -0.4
C9orf43-201ENST00000288462 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
C9orf43-201ENST00000288462 BICC1Q9H694 974 aaKnown RBP12.54□□□□□ -0.4
C9orf43-201ENST00000288462 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
C9orf43-201ENST00000288462 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
C9orf43-201ENST00000288462 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 EXOC5O00471 708 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 A1BGP04217 495 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 TEX13AQ9BXU3 409 aaPredicted RBP12.53□□□□□ -0.4
C9orf43-201ENST00000288462 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
C9orf43-201ENST00000288462 RREB1Q92766 1687 aa12.52□□□□□ -0.4
C9orf43-201ENST00000288462 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.4
C9orf43-201ENST00000288462 CASP7P55210 303 aa12.52□□□□□ -0.41
C9orf43-201ENST00000288462 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
C9orf43-201ENST00000288462 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
C9orf43-201ENST00000288462 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.41
C9orf43-201ENST00000288462 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
C9orf43-201ENST00000288462 RABL6Q3YEC7 729 aaPredicted RBP12.51□□□□□ -0.41
C9orf43-201ENST00000288462 EPHA10Q5JZY3 1008 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 PI4K2BQ8TCG2 481 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 KIF2CQ99661 725 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
C9orf43-201ENST00000288462 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
C9orf43-201ENST00000288462 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
C9orf43-201ENST00000288462 PA2G4Q9UQ80 394 aaKnown RBP12.5□□□□□ -0.41
C9orf43-201ENST00000288462 JCADQ9P266 1359 aa12.5□□□□□ -0.41
C9orf43-201ENST00000288462 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 OS9Q13438 667 aaPredicted RBP12.49□□□□□ -0.41
C9orf43-201ENST00000288462 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 ZNF831Q5JPB2 1677 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 H7C1W4 665 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 DDB1Q16531 1140 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 SLC4A9Q96Q91 983 aa12.49□□□□□ -0.41
C9orf43-201ENST00000288462 A0A087WZG4 1122 aa12.48□□□□□ -0.41
C9orf43-201ENST00000288462 STARD3NLO95772 234 aa12.48□□□□□ -0.41
C9orf43-201ENST00000288462 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
C9orf43-201ENST00000288462 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
C9orf43-201ENST00000288462 SNX21Q969T3 373 aa12.48□□□□□ -0.41
C9orf43-201ENST00000288462 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
C9orf43-201ENST00000288462 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
C9orf43-201ENST00000288462 BCL9LQ86UU0 1499 aa12.48□□□□□ -0.41
C9orf43-201ENST00000288462 ERC2O15083 957 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 SASH1O94885 1247 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
C9orf43-201ENST00000288462 ISCA1Q9BUE6 129 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 COPRSQ9NQ92 184 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
C9orf43-201ENST00000288462 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 REC8O95072 547 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
C9orf43-201ENST00000288462 NUP98P52948 1817 aa12.47□□□□□ -0.41
C9orf43-201ENST00000288462 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.41
C9orf43-201ENST00000288462 CHMLP26374 656 aa12.46□□□□□ -0.41
C9orf43-201ENST00000288462 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
C9orf43-201ENST00000288462 G3BP1Q13283 466 aaKnown RBP eCLIP12.46□□□□□ -0.41
C9orf43-201ENST00000288462 UNC5CLQ8IV45 518 aa12.46□□□□□ -0.41
C9orf43-201ENST00000288462 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
C9orf43-201ENST00000288462 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
C9orf43-201ENST00000288462 KAT6BQ8WYB5 2073 aa12.46□□□□□ -0.41
C9orf43-201ENST00000288462 FOXO4P98177 505 aa12.46□□□□□ -0.42
C9orf43-201ENST00000288462 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 GLRX3O76003 335 aaKnown RBP12.45□□□□□ -0.42
C9orf43-201ENST00000288462 PTPN12Q05209 780 aaKnown RBP12.45□□□□□ -0.42
C9orf43-201ENST00000288462 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
C9orf43-201ENST00000288462 KIF6Q6ZMV9 814 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 HSCBQ8IWL3 235 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
C9orf43-201ENST00000288462 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.45□□□□□ -0.42
C9orf43-201ENST00000288462 MAP3K15Q6ZN16 1313 aa12.45□□□□□ -0.42
C9orf43-201ENST00000288462 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms