RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 A0A0G2JS52 829 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 HMMRO75330 724 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 GSE1Q14687 1217 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 BMP2KLQ5H9B9 411 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 ANKRD44Q8N8A2 993 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 PXDNLA1KZ92 1463 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 RNMTO43148 476 aaKnown RBP9.3□□□□□ -0.92
TRIM42-201ENST00000286349 ANKRD45Q5TZF3 282 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 PTF1AQ7RTS3 328 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 DCTPP1Q9H773 170 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 PKD1L3Q7Z443 1732 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 SHANK3Q9BYB0 1731 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 PCDH11XQ9BZA7 1347 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 PCDH11YQ9BZA8 1340 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
TRIM42-201ENST00000286349 C1orf141Q5JVX7 400 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 MIS18AQ9NYP9 233 aa9.3□□□□□ -0.92
TRIM42-201ENST00000286349 PARP4Q9UKK3 1724 aaKnown RBP9.29□□□□□ -0.92
TRIM42-201ENST00000286349 WNK3Q9BYP7 1800 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 TAF3Q5VWG9 929 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 KRT27Q7Z3Y8 459 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
TRIM42-201ENST00000286349 SIRT2Q8IXJ6 389 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 MAP7D2Q96T17 732 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
TRIM42-201ENST00000286349 KCNQ2O43526 872 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 TPM2P07951 284 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 GNAI3P08754 354 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 TEFQ10587 303 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 FLIIQ13045 1269 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 DCAF5Q96JK2 942 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 ATP10DQ9P241 1426 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
TRIM42-201ENST00000286349 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 CEP85Q6P2H3 762 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 ACSBG1Q96GR2 724 aa9.28□□□□□ -0.92
TRIM42-201ENST00000286349 VGLL3A8MV65 326 aa9.27□□□□□ -0.93
TRIM42-201ENST00000286349 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
TRIM42-201ENST00000286349 N4BP2Q86UW6 1770 aaPredicted RBP9.27□□□□□ -0.93
TRIM42-201ENST00000286349 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
TRIM42-201ENST00000286349 SEC24BO95487 1268 aa9.27□□□□□ -0.93
TRIM42-201ENST00000286349 GNAI2P04899 355 aa9.27□□□□□ -0.93
TRIM42-201ENST00000286349 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
TRIM42-201ENST00000286349 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
TRIM42-201ENST00000286349 HDGFL1Q5TGJ6 251 aa9.27□□□□□ -0.93
TRIM42-201ENST00000286349 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
TRIM42-201ENST00000286349 PIGBQ92521 554 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 SLC52A2Q9HAB3 445 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 EP400Q96L91 3159 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 BRWD3Q6RI45 1802 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 ERVV-2B6SEH9 535 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 KCNQ3O43525 872 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 HSP90AB1P08238 724 aaKnown RBP9.26□□□□□ -0.93
TRIM42-201ENST00000286349 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 C22orf23Q9BZE7 217 aa9.26□□□□□ -0.93
TRIM42-201ENST00000286349 BCL9O00512 1426 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 ADAMTS7Q9UKP4 1686 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 SLC20A2Q08357 652 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 G2E3Q7L622 706 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 MEIS3Q99687 375 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 KIF20AO95235 890 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 ILDR2Q71H61 639 aa9.25□□□□□ -0.93
TRIM42-201ENST00000286349 TOGARAM1Q9Y4F4 1720 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 CABP4P57796 275 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 FAM196AQ6ZSG2 479 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 CLCN1P35523 988 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 RBM25P49756 843 aaKnown RBP9.24□□□□□ -0.93
TRIM42-201ENST00000286349 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
TRIM42-201ENST00000286349 DMTNQ08495 405 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 SLC39A6Q13433 755 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
TRIM42-201ENST00000286349 F6X3S4 739 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 CDC45O75419 566 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 CASC1Q6TDU7 716 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 SYTL4Q96C24 671 aaPredicted RBP9.23□□□□□ -0.93
TRIM42-201ENST00000286349 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 DBF4Q9UBU7 674 aaPredicted RBP9.23□□□□□ -0.93
TRIM42-201ENST00000286349 MRC1P22897 1456 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 TRIM37O94972 964 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 EGFL6Q8IUX8 553 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 YY1AP1Q9H869 796 aa9.23□□□□□ -0.93
TRIM42-201ENST00000286349 ATP8B2P98198 1209 aa9.22□□□□□ -0.93
TRIM42-201ENST00000286349 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
TRIM42-201ENST00000286349 SRCIN1Q9C0H9 1055 aa9.22□□□□□ -0.93
TRIM42-201ENST00000286349 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
TRIM42-201ENST00000286349 UBTFL1P0CB47 393 aaPredicted RBP9.22□□□□□ -0.93
TRIM42-201ENST00000286349 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
TRIM42-201ENST00000286349 RRAGDQ9NQL2 400 aaPredicted RBP9.22□□□□□ -0.93
TRIM42-201ENST00000286349 TMOD3Q9NYL9 352 aa9.22□□□□□ -0.93
TRIM42-201ENST00000286349 TTC36A6NLP5 189 aa9.21□□□□□ -0.94
TRIM42-201ENST00000286349 NFKBIBQ15653 356 aa9.21□□□□□ -0.94
TRIM42-201ENST00000286349 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms