RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 SIK1P57059 783 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 ANKRD44Q8N8A2 993 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 MARCH10Q8NA82 808 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 C22orf23Q9BZE7 217 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 MSL1Q68DK7 614 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 GZF1Q9H116 711 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
CCDC144B-201ENST00000285176 KDM4AO75164 1064 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 APPP05067 770 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 MX1P20591 662 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 RFC4P35249 363 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 HSP90AB3PQ58FF7 597 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 CRB1P82279 1406 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 TIMM10P62072 90 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 LDHAL6AQ6ZMR3 332 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 ERVV-2B6SEH9 535 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 METTL24Q5JXM2 366 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
CCDC144B-201ENST00000285176 HLFQ16534 295 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 EDC3Q96F86 508 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 ABCC4O15439 1325 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 NBPF26B4DH59 902 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 G3V3G9 751 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 NBPF14Q5TI25 921 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 NBPF10Q6P3W6 841 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 NBPF15Q8N660 670 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 CHD2O14647 1828 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 IFIT5Q13325 482 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 CEP126Q9P2H0 1117 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 USP32Q8NFA0 1604 aa10.99□□□□□ -0.65
CCDC144B-201ENST00000285176 SNAP23O00161 211 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 SRP68Q9UHB9 627 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 KDM2BQ8NHM5 1336 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 APBA3O96018 575 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 CRKLP46109 303 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 NUCB1Q02818 461 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 GCKRQ14397 625 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 NEURL1BA8MQ27 555 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 DDX46Q7L014 1031 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 METTL22Q9BUU2 404 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 KIF24Q5T7B8 1368 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 SETD1AO15047 1707 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 PPFIA3O75145 1194 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 HDAC1Q13547 482 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 NBPF5PQ86XG9 351 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 KIF1BPQ96EK5 621 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 ABCF2Q9UG63 623 aa10.98□□□□□ -0.65
CCDC144B-201ENST00000285176 CDC45O75419 566 aa10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 UPF3BQ9BZI7 483 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 IRS4O14654 1257 aaPredicted RBP10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 HSP90AB4PQ58FF6 505 aa10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 ISY1Q9ULR0 285 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 TAF5LO75529 589 aa10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 ZRSR1Q15695 479 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 EPHA10Q5JZY3 1008 aa10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
CCDC144B-201ENST00000285176 SDSP20132 328 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 FOSBP53539 338 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 TFCP2Q12800 502 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 DCTPP1Q9H773 170 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 IGKV5-2P06315 115 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 CHAF1AQ13111 956 aaPredicted RBP10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 PLBD2Q8NHP8 589 aa10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 RTCBQ9Y3I0 505 aaKnown RBP10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 XRN1Q8IZH2 1706 aaKnown RBP10.96□□□□□ -0.65
CCDC144B-201ENST00000285176 SMC5Q8IY18 1101 aa10.96□□□□□ -0.66
CCDC144B-201ENST00000285176 SPATA31A1Q5TZJ5 1347 aa10.96□□□□□ -0.66
CCDC144B-201ENST00000285176 C8orf34Q49A92 452 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 CCDC87Q9NVE4 849 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 GOLIM4O00461 696 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 ERC2O15083 957 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 PDE1AP54750 535 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 AAMPQ13685 434 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 TTC39AQ5SRH9 613 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 FAM196AQ6ZSG2 479 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 PUS3Q9BZE2 481 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 GOLGA6L4A6NEF3 574 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
CCDC144B-201ENST00000285176 FMN2Q9NZ56 1722 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms