RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
GGPS1-201ENST00000282841 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
GGPS1-201ENST00000282841 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
GGPS1-201ENST00000282841 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-201ENST00000282841 BCL9LQ86UU0 1499 aa13.65□□□□□ -0.22
GGPS1-201ENST00000282841 PDE4CQ08493 712 aa13.65□□□□□ -0.22
GGPS1-201ENST00000282841 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.22
GGPS1-201ENST00000282841 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
GGPS1-201ENST00000282841 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 HMMRO75330 724 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
GGPS1-201ENST00000282841 UBE3BQ7Z3V4 1068 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 SLIT2O94813 1529 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 GRM8O00222 908 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 SIL1Q9H173 461 aa13.64□□□□□ -0.23
GGPS1-201ENST00000282841 BICC1Q9H694 974 aaKnown RBP13.64□□□□□ -0.23
GGPS1-201ENST00000282841 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
GGPS1-201ENST00000282841 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
GGPS1-201ENST00000282841 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-201ENST00000282841 CHMP4AQ9BY43 222 aa13.63□□□□□ -0.23
GGPS1-201ENST00000282841 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
GGPS1-201ENST00000282841 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
GGPS1-201ENST00000282841 GLI3P10071 1580 aa13.62□□□□□ -0.23
GGPS1-201ENST00000282841 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
GGPS1-201ENST00000282841 GCKRQ14397 625 aa13.62□□□□□ -0.23
GGPS1-201ENST00000282841 CCDC85AQ96PX6 553 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-201ENST00000282841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-201ENST00000282841 BCL9O00512 1426 aa13.62□□□□□ -0.23
GGPS1-201ENST00000282841 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-201ENST00000282841 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
GGPS1-201ENST00000282841 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
GGPS1-201ENST00000282841 A0A087WZG4 1122 aa13.61□□□□□ -0.23
GGPS1-201ENST00000282841 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
GGPS1-201ENST00000282841 GPTP24298 496 aa13.61□□□□□ -0.23
GGPS1-201ENST00000282841 TNS2Q63HR2 1409 aa13.61□□□□□ -0.23
GGPS1-201ENST00000282841 ITGB4P16144 1822 aa13.61□□□□□ -0.23
GGPS1-201ENST00000282841 SYNE4Q8N205 404 aa13.61□□□□□ -0.23
GGPS1-201ENST00000282841 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
GGPS1-201ENST00000282841 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-201ENST00000282841 OS9Q13438 667 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-201ENST00000282841 AFF2P51816 1311 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
GGPS1-201ENST00000282841 CHMP3Q9Y3E7 222 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 ALDH1L1O75891 902 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 ATP6V1AP38606 617 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 VPS72Q15906 364 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 HLFQ16534 295 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
GGPS1-201ENST00000282841 PXDNLA1KZ92 1463 aa13.59□□□□□ -0.23
GGPS1-201ENST00000282841 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-201ENST00000282841 STARD3NLO95772 234 aa13.59□□□□□ -0.23
GGPS1-201ENST00000282841 CYP19A1P11511 503 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-201ENST00000282841 ITPK1Q13572 414 aa13.58□□□□□ -0.23
GGPS1-201ENST00000282841 BARGINQ6ZT62 677 aa13.58□□□□□ -0.23
GGPS1-201ENST00000282841 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.24
GGPS1-201ENST00000282841 DOT1LQ8TEK3 1739 aa13.57□□□□□ -0.24
GGPS1-201ENST00000282841 POLA2Q14181 598 aa13.57□□□□□ -0.24
GGPS1-201ENST00000282841 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
GGPS1-201ENST00000282841 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-201ENST00000282841 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
GGPS1-201ENST00000282841 IBTKQ9P2D0 1353 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-201ENST00000282841 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
GGPS1-201ENST00000282841 SIK1P57059 783 aa13.57□□□□□ -0.24
GGPS1-201ENST00000282841 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
GGPS1-201ENST00000282841 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
GGPS1-201ENST00000282841 PDE1AP54750 535 aa13.56□□□□□ -0.24
GGPS1-201ENST00000282841 TTC22Q5TAA0 569 aa13.56□□□□□ -0.24
GGPS1-201ENST00000282841 TBC1D9Q6ZT07 1266 aa13.56□□□□□ -0.24
GGPS1-201ENST00000282841 SPATA31A6Q5VVP1 1343 aa13.55□□□□□ -0.24
GGPS1-201ENST00000282841 SDSP20132 328 aa13.55□□□□□ -0.24
GGPS1-201ENST00000282841 BMP2KLQ5H9B9 411 aa13.55□□□□□ -0.24
GGPS1-201ENST00000282841 LMBR1LQ6UX01 489 aa13.55□□□□□ -0.24
GGPS1-201ENST00000282841 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-201ENST00000282841 CRKLP46109 303 aaKnown RBP13.54□□□□□ -0.24
GGPS1-201ENST00000282841 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
GGPS1-201ENST00000282841 ZNF594Q96JF6 807 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-201ENST00000282841 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
GGPS1-201ENST00000282841 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
GGPS1-201ENST00000282841 CWC25Q9NXE8 425 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-201ENST00000282841 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
GGPS1-201ENST00000282841 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
GGPS1-201ENST00000282841 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
GGPS1-201ENST00000282841 MX1P20591 662 aa13.54□□□□□ -0.24
GGPS1-201ENST00000282841 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-201ENST00000282841 INTS5Q6P9B9 1019 aaKnown RBP13.53□□□□□ -0.24
GGPS1-201ENST00000282841 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
GGPS1-201ENST00000282841 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
GGPS1-201ENST00000282841 DZIP3Q86Y13 1208 aaKnown RBP13.53□□□□□ -0.24
GGPS1-201ENST00000282841 SEPT12Q8IYM1 358 aa13.53□□□□□ -0.24
GGPS1-201ENST00000282841 TLR7Q9NYK1 1049 aaKnown RBP13.53□□□□□ -0.24
GGPS1-201ENST00000282841 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
GGPS1-201ENST00000282841 SASH1O94885 1247 aa13.52□□□□□ -0.24
GGPS1-201ENST00000282841 CASP7P55210 303 aa13.52□□□□□ -0.24
GGPS1-201ENST00000282841 IL27Q8NEV9 243 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms