RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 SMIM5Q71RC9 77 aa14.3□□□□□ -0.12
XRCC4-201ENST00000282268 METTL22Q9BUU2 404 aaPredicted RBP14.3□□□□□ -0.12
XRCC4-201ENST00000282268 RWDD1Q9H446 243 aaPredicted RBP14.3□□□□□ -0.12
XRCC4-201ENST00000282268 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
XRCC4-201ENST00000282268 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
XRCC4-201ENST00000282268 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
XRCC4-201ENST00000282268 JARID2Q92833 1246 aaPredicted RBP14.3□□□□□ -0.12
XRCC4-201ENST00000282268 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
XRCC4-201ENST00000282268 C9orf78Q9NZ63 289 aaPredicted RBP14.3□□□□□ -0.12
XRCC4-201ENST00000282268 TBC1D2BQ9UPU7 963 aa14.3□□□□□ -0.12
XRCC4-201ENST00000282268 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
XRCC4-201ENST00000282268 GNAI3P08754 354 aa14.29□□□□□ -0.12
XRCC4-201ENST00000282268 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
XRCC4-201ENST00000282268 LINS1Q8NG48 757 aa14.29□□□□□ -0.12
XRCC4-201ENST00000282268 SBF2Q86WG5 1849 aa14.28□□□□□ -0.12
XRCC4-201ENST00000282268 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
XRCC4-201ENST00000282268 ALDH1L1O75891 902 aa14.28□□□□□ -0.12
XRCC4-201ENST00000282268 GNAI2P04899 355 aa14.28□□□□□ -0.12
XRCC4-201ENST00000282268 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
XRCC4-201ENST00000282268 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
XRCC4-201ENST00000282268 ATP10DQ9P241 1426 aa14.28□□□□□ -0.12
XRCC4-201ENST00000282268 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.12
XRCC4-201ENST00000282268 NBPF7P0C2Y1 421 aaPredicted RBP14.27□□□□□ -0.12
XRCC4-201ENST00000282268 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.12
XRCC4-201ENST00000282268 APBA3O96018 575 aa14.26□□□□□ -0.13
XRCC4-201ENST00000282268 HLFQ16534 295 aa14.26□□□□□ -0.13
XRCC4-201ENST00000282268 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
XRCC4-201ENST00000282268 MAP3K15Q6ZN16 1313 aa14.26□□□□□ -0.13
XRCC4-201ENST00000282268 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
XRCC4-201ENST00000282268 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
XRCC4-201ENST00000282268 SIRT2Q8IXJ6 389 aa14.26□□□□□ -0.13
XRCC4-201ENST00000282268 GNPATO15228 680 aa14.25□□□□□ -0.13
XRCC4-201ENST00000282268 GPTP24298 496 aa14.25□□□□□ -0.13
XRCC4-201ENST00000282268 EIF5P55010 431 aaKnown RBP14.25□□□□□ -0.13
XRCC4-201ENST00000282268 GCKRQ14397 625 aa14.25□□□□□ -0.13
XRCC4-201ENST00000282268 LRRC4BQ9NT99 713 aa14.25□□□□□ -0.13
XRCC4-201ENST00000282268 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
XRCC4-201ENST00000282268 GRM8O00222 908 aa14.24□□□□□ -0.13
XRCC4-201ENST00000282268 PHF14O94880 888 aa14.24□□□□□ -0.13
XRCC4-201ENST00000282268 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
XRCC4-201ENST00000282268 ANKRD44Q8N8A2 993 aa14.24□□□□□ -0.13
XRCC4-201ENST00000282268 A0A087WZG4 1122 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 SUCLG2Q96I99 432 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 AK7Q96M32 723 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 CNTNAP4Q9C0A0 1308 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 COL15A1P39059 1388 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 APBB1O00213 710 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 UBE3BQ7Z3V4 1068 aa14.23□□□□□ -0.13
XRCC4-201ENST00000282268 RPAP2Q8IXW5 612 aaPredicted RBP14.23□□□□□ -0.13
XRCC4-201ENST00000282268 CWC25Q9NXE8 425 aaPredicted RBP14.23□□□□□ -0.13
XRCC4-201ENST00000282268 FAM177BA6PVY3 158 aa14.22□□□□□ -0.13
XRCC4-201ENST00000282268 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
XRCC4-201ENST00000282268 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
XRCC4-201ENST00000282268 COL5A3P25940 1745 aaPredicted RBP14.21□□□□□ -0.13
XRCC4-201ENST00000282268 NUP188Q5SRE5 1749 aa14.21□□□□□ -0.13
XRCC4-201ENST00000282268 PNMA6EA0A0J9YXQ4 647 aa14.21□□□□□ -0.13
XRCC4-201ENST00000282268 RGS3P49796 1198 aa14.21□□□□□ -0.13
XRCC4-201ENST00000282268 TXNRD1Q16881 649 aa14.21□□□□□ -0.13
XRCC4-201ENST00000282268 RC3H1Q5TC82 1133 aaKnown RBP14.21□□□□□ -0.13
XRCC4-201ENST00000282268 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
XRCC4-201ENST00000282268 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
XRCC4-201ENST00000282268 RTCBQ9Y3I0 505 aaKnown RBP14.21□□□□□ -0.13
XRCC4-201ENST00000282268 LY75O60449 1722 aa14.21□□□□□ -0.14
XRCC4-201ENST00000282268 RPS6KA4O75676 772 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 CAMTA2O94983 1202 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 AMIGO3Q86WK7 504 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 SRP68Q9UHB9 627 aaKnown RBP14.2□□□□□ -0.14
XRCC4-201ENST00000282268 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
XRCC4-201ENST00000282268 MYH14Q7Z406 1995 aaKnown RBP14.2□□□□□ -0.14
XRCC4-201ENST00000282268 CICQ96RK0 1608 aaPredicted RBP14.2□□□□□ -0.14
XRCC4-201ENST00000282268 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 HMMRO75330 724 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 PROM2Q8N271 834 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
XRCC4-201ENST00000282268 BICC1Q9H694 974 aaKnown RBP14.2□□□□□ -0.14
XRCC4-201ENST00000282268 ZNF831Q5JPB2 1677 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 RREB1Q92766 1687 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 ANKRD45Q5TZF3 282 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 USPL1Q5W0Q7 1092 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
XRCC4-201ENST00000282268 NLRP10Q86W26 655 aa14.18□□□□□ -0.14
XRCC4-201ENST00000282268 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
XRCC4-201ENST00000282268 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
XRCC4-201ENST00000282268 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
XRCC4-201ENST00000282268 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
XRCC4-201ENST00000282268 UTYO14607 1347 aa14.18□□□□□ -0.14
XRCC4-201ENST00000282268 H7C1W4 665 aa14.17□□□□□ -0.14
XRCC4-201ENST00000282268 ZPR1O75312 459 aa14.17□□□□□ -0.14
XRCC4-201ENST00000282268 TRAPPC3LQ5T215 181 aa14.17□□□□□ -0.14
XRCC4-201ENST00000282268 SMC5Q8IY18 1101 aa14.17□□□□□ -0.14
XRCC4-201ENST00000282268 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
XRCC4-201ENST00000282268 KAZALD1Q96I82 304 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms