RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 CHPF2Q9P2E5 772 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 HEG1Q9ULI3 1381 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 WDHD1O75717 1129 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-201ENST00000281821 GLRX3O76003 335 aaKnown RBP9.45□□□□□ -0.9
EPHA4-201ENST00000281821 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
EPHA4-201ENST00000281821 SLC39A6Q13433 755 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 DNAJC10Q8IXB1 793 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
EPHA4-201ENST00000281821 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 METTL24Q5JXM2 366 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 PLEKHF1Q96S99 279 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 XRN1Q8IZH2 1706 aaKnown RBP9.44□□□□□ -0.9
EPHA4-201ENST00000281821 ARHGEF28Q8N1W1 1705 aaKnown RBP9.44□□□□□ -0.9
EPHA4-201ENST00000281821 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 CTNNA3Q9UI47 895 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 CCDC34Q96HJ3 373 aa9.44□□□□□ -0.9
EPHA4-201ENST00000281821 SSFA2P28290 1259 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 TTC39AQ5SRH9 613 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 PANK1Q8TE04 598 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 TCIRG1Q13488 830 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 POLR1AO95602 1720 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-201ENST00000281821 GSTO1P78417 241 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 KAT6BQ8WYB5 2073 aa9.43□□□□□ -0.9
EPHA4-201ENST00000281821 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
EPHA4-201ENST00000281821 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 SIGLEC1Q9BZZ2 1709 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 CYP27B1O15528 508 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 PDE8AO60658 829 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 GIGYF2Q6Y7W6 1299 aaKnown RBP9.42□□□□□ -0.9
EPHA4-201ENST00000281821 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 HSCBQ8IWL3 235 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 CDC45O75419 566 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 UBE3BQ7Z3V4 1068 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 RGS12O14924 1447 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 ST18O60284 1047 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
EPHA4-201ENST00000281821 EXOC6Q8TAG9 804 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 C8orf58Q8NAV2 365 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 LGR6Q9HBX8 967 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
EPHA4-201ENST00000281821 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 H0YIN7 160 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-201ENST00000281821 TRIM27P14373 513 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 TMEM57Q8N5G2 664 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 JDP2Q8WYK2 163 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 MAST3O60307 1309 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 MAP3K15Q6ZN16 1313 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 NBR1Q14596 966 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 HOOK2Q96ED9 719 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 PCCAP05165 728 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-201ENST00000281821 PTMSP20962 102 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 MAP3K12Q12852 859 aa9.41□□□□□ -0.9
EPHA4-201ENST00000281821 BCAR3O75815 825 aa9.4□□□□□ -0.9
EPHA4-201ENST00000281821 PSMA5P28066 241 aa9.4□□□□□ -0.9
EPHA4-201ENST00000281821 IRS4O14654 1257 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-201ENST00000281821 PLCG2P16885 1265 aa9.4□□□□□ -0.9
EPHA4-201ENST00000281821 ZNF804AQ7Z570 1209 aa9.4□□□□□ -0.9
EPHA4-201ENST00000281821 FSD1Q9BTV5 496 aa9.4□□□□□ -0.9
EPHA4-201ENST00000281821 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-201ENST00000281821 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
EPHA4-201ENST00000281821 ERICH2A1L162 156 aa9.4□□□□□ -0.91
EPHA4-201ENST00000281821 ATP8B2P98198 1209 aa9.4□□□□□ -0.91
EPHA4-201ENST00000281821 FAM161AQ3B820 660 aa9.4□□□□□ -0.91
EPHA4-201ENST00000281821 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.91
EPHA4-201ENST00000281821 TRIM28Q13263 835 aaKnown RBP9.39□□□□□ -0.91
EPHA4-201ENST00000281821 RALYLQ86SE5 291 aaKnown RBP9.39□□□□□ -0.91
EPHA4-201ENST00000281821 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 PIGBQ92521 554 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 GPTP24298 496 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 KRT32Q14532 448 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 GLIPR1L2Q4G1C9 344 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 NARFQ9UHQ1 456 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 PHF14O94880 888 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 BAG3O95817 575 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
EPHA4-201ENST00000281821 ATG3Q9NT62 314 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
EPHA4-201ENST00000281821 PLIN1O60240 522 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 MCM2P49736 904 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 RILPL2Q969X0 211 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 TNS2Q63HR2 1409 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 CRKLP46109 303 aaKnown RBP9.38□□□□□ -0.91
EPHA4-201ENST00000281821 ZNF622Q969S3 477 aaKnown RBP eCLIP9.38□□□□□ -0.91
EPHA4-201ENST00000281821 BBOX1O75936 387 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 TRIM37O94972 964 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 TBC1D22AQ8WUA7 517 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-201ENST00000281821 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 MYO1BO43795 1136 aa9.38□□□□□ -0.91
EPHA4-201ENST00000281821 NT5C2P49902 561 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms