RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 SRGAP3O43295 1099 aa16.63■□□□□ 0.25
ACER3-201ENST00000278544 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
ACER3-201ENST00000278544 POTEAQ6S8J7 498 aa16.63■□□□□ 0.25
ACER3-201ENST00000278544 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
ACER3-201ENST00000278544 MRC1P22897 1456 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 GNAI3P08754 354 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
ACER3-201ENST00000278544 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 ITGB4P16144 1822 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
ACER3-201ENST00000278544 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
ACER3-201ENST00000278544 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
ACER3-201ENST00000278544 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
ACER3-201ENST00000278544 GLI3P10071 1580 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
ACER3-201ENST00000278544 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
ACER3-201ENST00000278544 GRM8O00222 908 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 LINC00116Q8NCU8 138 aa16.61■□□□□ 0.25
ACER3-201ENST00000278544 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
ACER3-201ENST00000278544 UTRNP46939 3433 aa16.6■□□□□ 0.25
ACER3-201ENST00000278544 RXRBP28702 533 aa16.6■□□□□ 0.25
ACER3-201ENST00000278544 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
ACER3-201ENST00000278544 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
ACER3-201ENST00000278544 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
ACER3-201ENST00000278544 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
ACER3-201ENST00000278544 PDE4AP27815 886 aa16.6■□□□□ 0.25
ACER3-201ENST00000278544 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
ACER3-201ENST00000278544 CHMP4BQ9H444 224 aaKnown RBP16.59■□□□□ 0.25
ACER3-201ENST00000278544 RGS17Q9UGC6 210 aaPredicted RBP16.59■□□□□ 0.25
ACER3-201ENST00000278544 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
ACER3-201ENST00000278544 HDAC1Q13547 482 aaPredicted RBP16.59■□□□□ 0.25
ACER3-201ENST00000278544 GCKRQ14397 625 aa16.59■□□□□ 0.25
ACER3-201ENST00000278544 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
ACER3-201ENST00000278544 GNPATO15228 680 aa16.59■□□□□ 0.25
ACER3-201ENST00000278544 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
ACER3-201ENST00000278544 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
ACER3-201ENST00000278544 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.25
ACER3-201ENST00000278544 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
ACER3-201ENST00000278544 FBXO41Q8TF61 875 aa16.58■□□□□ 0.24
ACER3-201ENST00000278544 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
ACER3-201ENST00000278544 ATRNO75882 1429 aa16.58■□□□□ 0.24
ACER3-201ENST00000278544 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
ACER3-201ENST00000278544 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
ACER3-201ENST00000278544 ATP10DQ9P241 1426 aa16.56■□□□□ 0.24
ACER3-201ENST00000278544 MSH5O43196 834 aa16.56■□□□□ 0.24
ACER3-201ENST00000278544 RPAP2Q8IXW5 612 aaPredicted RBP16.56■□□□□ 0.24
ACER3-201ENST00000278544 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
ACER3-201ENST00000278544 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
ACER3-201ENST00000278544 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
ACER3-201ENST00000278544 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
ACER3-201ENST00000278544 SMARCC1Q92922 1105 aaPredicted RBP16.56■□□□□ 0.24
ACER3-201ENST00000278544 HMMRO75330 724 aa16.55■□□□□ 0.24
ACER3-201ENST00000278544 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
ACER3-201ENST00000278544 CWC25Q9NXE8 425 aaPredicted RBP16.54■□□□□ 0.24
ACER3-201ENST00000278544 APBA3O96018 575 aa16.54■□□□□ 0.24
ACER3-201ENST00000278544 ATP8B2P98198 1209 aa16.54■□□□□ 0.24
ACER3-201ENST00000278544 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
ACER3-201ENST00000278544 AAMPQ13685 434 aa16.54■□□□□ 0.24
ACER3-201ENST00000278544 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
ACER3-201ENST00000278544 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
ACER3-201ENST00000278544 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
ACER3-201ENST00000278544 TRMT112Q9UI30 125 aaKnown RBP16.53■□□□□ 0.24
ACER3-201ENST00000278544 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
ACER3-201ENST00000278544 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
ACER3-201ENST00000278544 DCTPP1Q9H773 170 aa16.53■□□□□ 0.24
ACER3-201ENST00000278544 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
ACER3-201ENST00000278544 NUCB1Q02818 461 aa16.53■□□□□ 0.24
ACER3-201ENST00000278544 MAP3K15Q6ZN16 1313 aa16.52■□□□□ 0.24
ACER3-201ENST00000278544 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
ACER3-201ENST00000278544 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.23
ACER3-201ENST00000278544 TCIRG1Q13488 830 aa16.52■□□□□ 0.23
ACER3-201ENST00000278544 NIP7Q9Y221 180 aaKnown RBP eCLIP16.52■□□□□ 0.23
ACER3-201ENST00000278544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.23
ACER3-201ENST00000278544 NPHP1O15259 732 aa16.51■□□□□ 0.23
ACER3-201ENST00000278544 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
ACER3-201ENST00000278544 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
ACER3-201ENST00000278544 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
ACER3-201ENST00000278544 WNK3Q9BYP7 1800 aa16.5■□□□□ 0.23
ACER3-201ENST00000278544 IL6STP40189 918 aaPredicted RBP16.5■□□□□ 0.23
ACER3-201ENST00000278544 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
ACER3-201ENST00000278544 CACNA1FO60840 1977 aa16.5■□□□□ 0.23
ACER3-201ENST00000278544 AK7Q96M32 723 aa16.49■□□□□ 0.23
ACER3-201ENST00000278544 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
ACER3-201ENST00000278544 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
ACER3-201ENST00000278544 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
ACER3-201ENST00000278544 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
ACER3-201ENST00000278544 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
ACER3-201ENST00000278544 SEC24BO95487 1268 aa16.48■□□□□ 0.23
ACER3-201ENST00000278544 NLRP10Q86W26 655 aa16.48■□□□□ 0.23
ACER3-201ENST00000278544 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
ACER3-201ENST00000278544 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms