RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 NOL8Q76FK4 1167 aaKnown RBP12.48□□□□□ -0.41
LSG1-201ENST00000265245 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 RAD50Q92878 1312 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
LSG1-201ENST00000265245 USP42Q9H9J4 1324 aaKnown RBP12.48□□□□□ -0.41
LSG1-201ENST00000265245 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 GRM8O00222 908 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 IFIT2P09913 472 aaKnown RBP12.48□□□□□ -0.41
LSG1-201ENST00000265245 ATF3P18847 181 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 ZDHHC9Q9Y397 364 aa12.48□□□□□ -0.41
LSG1-201ENST00000265245 PRPF40AO75400 957 aaKnown RBP12.47□□□□□ -0.41
LSG1-201ENST00000265245 IL25Q9H293 177 aa12.47□□□□□ -0.41
LSG1-201ENST00000265245 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
LSG1-201ENST00000265245 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
LSG1-201ENST00000265245 RGPD2P0DJD1 1756 aa12.47□□□□□ -0.41
LSG1-201ENST00000265245 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
LSG1-201ENST00000265245 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
LSG1-201ENST00000265245 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
LSG1-201ENST00000265245 RUFY2Q8WXA3 655 aa12.47□□□□□ -0.41
LSG1-201ENST00000265245 ZNF790Q6PG37 636 aa12.46□□□□□ -0.41
LSG1-201ENST00000265245 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
LSG1-201ENST00000265245 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.41
LSG1-201ENST00000265245 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
LSG1-201ENST00000265245 TRPM3Q9HCF6 1732 aaPredicted RBP12.46□□□□□ -0.41
LSG1-201ENST00000265245 CWC27Q6UX04 472 aaKnown RBP12.46□□□□□ -0.41
LSG1-201ENST00000265245 NPHP3Q7Z494 1330 aa12.46□□□□□ -0.42
LSG1-201ENST00000265245 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.42
LSG1-201ENST00000265245 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.42
LSG1-201ENST00000265245 TRIM44Q96DX7 344 aaPredicted RBP12.46□□□□□ -0.42
LSG1-201ENST00000265245 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
LSG1-201ENST00000265245 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 SLC52A2Q9HAB3 445 aa12.45□□□□□ -0.42
LSG1-201ENST00000265245 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
LSG1-201ENST00000265245 BRD1O95696 1058 aa12.45□□□□□ -0.42
LSG1-201ENST00000265245 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 MST1RQ04912 1400 aa12.45□□□□□ -0.42
LSG1-201ENST00000265245 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 ZNF445P59923 1031 aa12.45□□□□□ -0.42
LSG1-201ENST00000265245 G3BP1Q13283 466 aaKnown RBP eCLIP12.45□□□□□ -0.42
LSG1-201ENST00000265245 LSG1Q9H089 658 aaKnown RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 RRAGDQ9NQL2 400 aaPredicted RBP12.45□□□□□ -0.42
LSG1-201ENST00000265245 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 AACSQ86V21 672 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
LSG1-201ENST00000265245 SUCLG2Q96I99 432 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 UTYO14607 1347 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 PHKG2P15735 406 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
LSG1-201ENST00000265245 SNX14Q9Y5W7 946 aa12.44□□□□□ -0.42
LSG1-201ENST00000265245 MBD3O95983 291 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 PDIA6Q15084 440 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 CAMTA1Q9Y6Y1 1673 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 EVI5LQ96CN4 794 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 MYL6BP14649 208 aa12.43□□□□□ -0.42
LSG1-201ENST00000265245 AK9Q5TCS8 1911 aa12.42□□□□□ -0.42
LSG1-201ENST00000265245 WDR33Q9C0J8 1336 aaKnown RBP12.42□□□□□ -0.42
LSG1-201ENST00000265245 HIP1O00291 1037 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 CCDC173Q0VFZ6 552 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 GPT2Q8TD30 523 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 XAGE3Q8WTP9 111 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
LSG1-201ENST00000265245 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 COPS6Q7L5N1 327 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 KAZALD1Q96I82 304 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
LSG1-201ENST00000265245 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 SNRPA1P09661 255 aaKnown RBP12.41□□□□□ -0.42
LSG1-201ENST00000265245 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 LIMCH1Q9UPQ0 1083 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 ALS2Q96Q42 1657 aa12.41□□□□□ -0.42
LSG1-201ENST00000265245 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 SASH1O94885 1247 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 GCKRQ14397 625 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 DDX17Q92841 729 aaKnown RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 TTC14Q96N46 770 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 MYD88Q99836 296 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 METTL22Q9BUU2 404 aaPredicted RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 SIL1Q9H173 461 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 ZNF335Q9H4Z2 1342 aaPredicted RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 CLCN1P35523 988 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 AK2P54819 239 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
LSG1-201ENST00000265245 EAF2Q96CJ1 260 aaPredicted RBP12.4□□□□□ -0.42
LSG1-201ENST00000265245 VGLL3A8MV65 326 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 ESPNB1AK53 854 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms