RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 TRAK2O60296 914 aa12.76□□□□□ -0.37
COMMD9-201ENST00000263401 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
COMMD9-201ENST00000263401 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
COMMD9-201ENST00000263401 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
COMMD9-201ENST00000263401 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
COMMD9-201ENST00000263401 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
COMMD9-201ENST00000263401 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
COMMD9-201ENST00000263401 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
COMMD9-201ENST00000263401 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
COMMD9-201ENST00000263401 NEURL1BA8MQ27 555 aa12.75□□□□□ -0.37
COMMD9-201ENST00000263401 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
COMMD9-201ENST00000263401 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
COMMD9-201ENST00000263401 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
COMMD9-201ENST00000263401 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
COMMD9-201ENST00000263401 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
COMMD9-201ENST00000263401 AACSQ86V21 672 aa12.75□□□□□ -0.37
COMMD9-201ENST00000263401 SASH1O94885 1247 aa12.75□□□□□ -0.37
COMMD9-201ENST00000263401 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
COMMD9-201ENST00000263401 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
COMMD9-201ENST00000263401 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
COMMD9-201ENST00000263401 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
COMMD9-201ENST00000263401 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
COMMD9-201ENST00000263401 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
COMMD9-201ENST00000263401 A1BGP04217 495 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 GCKRQ14397 625 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
COMMD9-201ENST00000263401 EAF2Q96CJ1 260 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-201ENST00000263401 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-201ENST00000263401 WDR17Q8IZU2 1322 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 ST18O60284 1047 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 CPA1P15085 419 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 MTX1Q13505 466 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
COMMD9-201ENST00000263401 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
COMMD9-201ENST00000263401 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
COMMD9-201ENST00000263401 CPDO75976 1380 aa12.72□□□□□ -0.37
COMMD9-201ENST00000263401 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
COMMD9-201ENST00000263401 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
COMMD9-201ENST00000263401 METTL22Q9BUU2 404 aaPredicted RBP12.72□□□□□ -0.37
COMMD9-201ENST00000263401 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
COMMD9-201ENST00000263401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
COMMD9-201ENST00000263401 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
COMMD9-201ENST00000263401 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
COMMD9-201ENST00000263401 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-201ENST00000263401 COL5A2P05997 1499 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-201ENST00000263401 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.37
COMMD9-201ENST00000263401 CHGBP05060 677 aa12.71□□□□□ -0.37
COMMD9-201ENST00000263401 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
COMMD9-201ENST00000263401 TMX3Q96JJ7 454 aa12.71□□□□□ -0.37
COMMD9-201ENST00000263401 EVA1CP58658 441 aa12.71□□□□□ -0.38
COMMD9-201ENST00000263401 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.38
COMMD9-201ENST00000263401 CNTROBQ8N137 903 aa12.71□□□□□ -0.38
COMMD9-201ENST00000263401 BOLA2Q9H3K6 86 aa12.71□□□□□ -0.38
COMMD9-201ENST00000263401 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.38
COMMD9-201ENST00000263401 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.38
COMMD9-201ENST00000263401 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
COMMD9-201ENST00000263401 AOX1Q06278 1338 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 GLI3P10071 1580 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 A0A087WZG4 1122 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 SGSM2O43147 1006 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 PTH1RQ03431 593 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
COMMD9-201ENST00000263401 HSP90AB4PQ58FF6 505 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
COMMD9-201ENST00000263401 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 MRC1P22897 1456 aa12.7□□□□□ -0.38
COMMD9-201ENST00000263401 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 UTYO14607 1347 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 BAG4O95429 457 aaKnown RBP12.69□□□□□ -0.38
COMMD9-201ENST00000263401 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
COMMD9-201ENST00000263401 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 GLRX3O76003 335 aaKnown RBP12.69□□□□□ -0.38
COMMD9-201ENST00000263401 IL2RBP14784 551 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 MCCP23508 829 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
COMMD9-201ENST00000263401 ARFGEF2Q9Y6D5 1785 aa12.68□□□□□ -0.38
COMMD9-201ENST00000263401 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
COMMD9-201ENST00000263401 TFCP2Q12800 502 aa12.67□□□□□ -0.38
COMMD9-201ENST00000263401 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
COMMD9-201ENST00000263401 RAD50Q92878 1312 aa12.67□□□□□ -0.38
COMMD9-201ENST00000263401 HSPA4P34932 840 aa12.67□□□□□ -0.38
COMMD9-201ENST00000263401 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
COMMD9-201ENST00000263401 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
COMMD9-201ENST00000263401 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
COMMD9-201ENST00000263401 TTC41PQ6P2S7 1318 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 LMBR1LQ6UX01 489 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 ASAP1Q9ULH1 1129 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms