RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 XAGE3Q8WTP9 111 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 NBPF26B4DH59 902 aa16■□□□□ 0.15
CLNS1A-201ENST00000263309 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
CLNS1A-201ENST00000263309 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
CLNS1A-201ENST00000263309 PARP10Q53GL7 1025 aa16■□□□□ 0.15
CLNS1A-201ENST00000263309 NBPF10Q6P3W6 841 aaKnown RBP16■□□□□ 0.15
CLNS1A-201ENST00000263309 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
CLNS1A-201ENST00000263309 NBPF15Q8N660 670 aa16■□□□□ 0.15
CLNS1A-201ENST00000263309 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
CLNS1A-201ENST00000263309 NIP7Q9Y221 180 aaKnown RBP eCLIP16■□□□□ 0.15
CLNS1A-201ENST00000263309 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
CLNS1A-201ENST00000263309 FKBP5Q13451 457 aaPredicted RBP15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 SYT17Q9BSW7 474 aa15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 FHDC1Q9C0D6 1143 aaPredicted RBP15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
CLNS1A-201ENST00000263309 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
CLNS1A-201ENST00000263309 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
CLNS1A-201ENST00000263309 CAMTA2O94983 1202 aa15.98■□□□□ 0.15
CLNS1A-201ENST00000263309 FKBP8Q14318 412 aa15.98■□□□□ 0.15
CLNS1A-201ENST00000263309 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
CLNS1A-201ENST00000263309 SERPINB2P05120 415 aa15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 PDE6BP35913 854 aa15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 SMIM5Q71RC9 77 aa15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 CARMIL3Q8ND23 1372 aa15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 TJP1Q07157 1748 aa15.97■□□□□ 0.15
CLNS1A-201ENST00000263309 TM4SF1P30408 202 aa15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 TGFB2P61812 414 aa15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 PDIA6Q15084 440 aa15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 CNBD1Q8NA66 436 aa15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 COL5A3P25940 1745 aaPredicted RBP15.96■□□□□ 0.15
CLNS1A-201ENST00000263309 QSER1Q2KHR3 1735 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 ANXA1P04083 346 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 MS4A1P11836 297 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 NFIXQ14938 502 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 HDAC5Q9UQL6 1122 aa15.95■□□□□ 0.14
CLNS1A-201ENST00000263309 PTPRCP08575 1304 aa15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 H0YIN7 160 aa15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 FLIIQ13045 1269 aa15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 UTP14AQ9BVJ6 771 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
CLNS1A-201ENST00000263309 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
CLNS1A-201ENST00000263309 AMIGO3Q86WK7 504 aa15.93■□□□□ 0.14
CLNS1A-201ENST00000263309 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
CLNS1A-201ENST00000263309 TRMT112Q9UI30 125 aaKnown RBP15.93■□□□□ 0.14
CLNS1A-201ENST00000263309 KIF16BQ96L93 1317 aa15.93■□□□□ 0.14
CLNS1A-201ENST00000263309 GPTP24298 496 aa15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 HLFQ16534 295 aa15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 API5Q9BZZ5 524 aaKnown RBP15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
CLNS1A-201ENST00000263309 UBR3Q6ZT12 1888 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 PI4KAP2A4QPH2 592 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 POLRMTO00411 1230 aaKnown RBP15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 PI4KAP1Q8N8J0 262 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 CCDC191Q8NCU4 936 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 DNAAF4Q8WXU2 420 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 NLRP3Q96P20 1036 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 MYD88Q99836 296 aa15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 METTL22Q9BUU2 404 aaPredicted RBP15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 CWC25Q9NXE8 425 aaPredicted RBP15.91■□□□□ 0.14
CLNS1A-201ENST00000263309 SLC4A10Q6U841 1118 aa15.9■□□□□ 0.14
CLNS1A-201ENST00000263309 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
CLNS1A-201ENST00000263309 BCL2L12Q9HB09 334 aa15.9■□□□□ 0.14
CLNS1A-201ENST00000263309 ALDH1B1P30837 517 aa15.89■□□□□ 0.13
CLNS1A-201ENST00000263309 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
CLNS1A-201ENST00000263309 GPR162Q16538 588 aa15.89■□□□□ 0.13
CLNS1A-201ENST00000263309 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
CLNS1A-201ENST00000263309 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 LINS1Q8NG48 757 aa15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 SSH1Q8WYL5 1049 aa15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 ARHGAP45Q92619 1136 aa15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 RPGRQ92834 1020 aaKnown RBP15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 FRAT1Q92837 279 aaPredicted RBP15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
CLNS1A-201ENST00000263309 ATP5J2-PTCD1G3V325 749 aa15.87■□□□□ 0.13
CLNS1A-201ENST00000263309 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms