RNA–Protein interactions for RNA: ENST00000262056.13

EIF4B-201, Transcript of eukaryotic translation initiation factor 4B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EIF4B, Length 4,148 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-201ENST00000262056 KIF24Q5T7B8 1368 aa9.53□□□□□ -0.88
EIF4B-201ENST00000262056 A0A087WZG4 1122 aa9.53□□□□□ -0.88
EIF4B-201ENST00000262056 SMARCA5O60264 1052 aaPredicted RBP9.53□□□□□ -0.88
EIF4B-201ENST00000262056 G3BP1Q13283 466 aaKnown RBP eCLIP9.53□□□□□ -0.882e-6■□□□□ 9.7
EIF4B-201ENST00000262056 NEUROD6Q96NK8 337 aa9.53□□□□□ -0.88
EIF4B-201ENST00000262056 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.88
EIF4B-201ENST00000262056 MAP4K4O95819 1239 aaPredicted RBP9.52□□□□□ -0.88
EIF4B-201ENST00000262056 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.88
EIF4B-201ENST00000262056 DNAAF4Q8WXU2 420 aa9.52□□□□□ -0.88
EIF4B-201ENST00000262056 PHAXQ9H814 394 aaKnown RBP9.52□□□□□ -0.88
EIF4B-201ENST00000262056 CCDC87Q9NVE4 849 aa9.52□□□□□ -0.88
EIF4B-201ENST00000262056 PRAMEF22A3QJZ6 481 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 GNAI2P04899 355 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 GNAI3P08754 354 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 SMIM5Q71RC9 77 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 GAS2L3Q86XJ1 694 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
EIF4B-201ENST00000262056 MPHOSPH8Q99549 860 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 CNNM1Q9NRU3 951 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
EIF4B-201ENST00000262056 UBE3BQ7Z3V4 1068 aa9.52□□□□□ -0.89
EIF4B-201ENST00000262056 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
EIF4B-201ENST00000262056 DIAPH3Q9NSV4 1193 aa9.51□□□□□ -0.89
EIF4B-201ENST00000262056 CLCN1P35523 988 aa9.51□□□□□ -0.89
EIF4B-201ENST00000262056 CHAMP1Q96JM3 812 aa9.51□□□□□ -0.89
EIF4B-201ENST00000262056 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
EIF4B-201ENST00000262056 NRXN3Q9Y4C0 1643 aa9.51□□□□□ -0.89
EIF4B-201ENST00000262056 K7ELQ4 463 aaPredicted RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 SRGAP3O43295 1099 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 TXNRD1Q16881 649 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CHL1O00533 1208 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 EIF4A1P60842 406 aaKnown RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 HSP90AB3PQ58FF7 597 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 BARGINQ6ZT62 677 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 RBM27Q9P2N5 1060 aaKnown RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CPDO75976 1380 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 SKOR2Q2VWA4 1001 aaPredicted RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
EIF4B-201ENST00000262056 RPGRQ92834 1020 aaKnown RBP9.5□□□□□ -0.89
EIF4B-201ENST00000262056 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 ST18O60284 1047 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 ZBTB7AO95365 584 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 CCT4P50991 539 aaKnown RBP9.49□□□□□ -0.89
EIF4B-201ENST00000262056 TOMM22Q9NS69 142 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
EIF4B-201ENST00000262056 AAMPQ13685 434 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 CCDC27Q2M243 656 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 CWF19L2Q2TBE0 894 aaKnown RBP9.49□□□□□ -0.89
EIF4B-201ENST00000262056 G2E3Q7L622 706 aa9.49□□□□□ -0.89
EIF4B-201ENST00000262056 DDX21Q9NR30 783 aaKnown RBP eCLIP9.49□□□□□ -0.89
EIF4B-201ENST00000262056 CHD2O14647 1828 aaKnown RBP9.48□□□□□ -0.89
EIF4B-201ENST00000262056 VAMP4O75379 141 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 R3HDM1Q15032 1099 aaKnown RBP9.48□□□□□ -0.89
EIF4B-201ENST00000262056 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 PPP1R42Q7Z4L9 355 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
EIF4B-201ENST00000262056 CLASRPQ8N2M8 674 aaKnown RBP9.48□□□□□ -0.89
EIF4B-201ENST00000262056 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 IL16Q14005 1332 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 GCC1Q96CN9 775 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 GOLGA6L4A6NEF3 574 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 REC8O95072 547 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 ALDH1L2Q3SY69 923 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 TPTE2Q6XPS3 522 aa9.48□□□□□ -0.89
EIF4B-201ENST00000262056 CWC25Q9NXE8 425 aaPredicted RBP9.48□□□□□ -0.89
EIF4B-201ENST00000262056 CDC45O75419 566 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 EZH2Q15910 746 aaKnown RBP9.47□□□□□ -0.89
EIF4B-201ENST00000262056 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
EIF4B-201ENST00000262056 ST5P78524 1137 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 TTLL7Q6ZT98 887 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 FAM89AQ96GI7 184 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 MEIS3Q99687 375 aa9.47□□□□□ -0.89
EIF4B-201ENST00000262056 LRRFIP2Q9Y608 721 aaKnown RBP9.46□□□□□ -0.89
EIF4B-201ENST00000262056 ROBO1Q9Y6N7 1651 aa9.46□□□□□ -0.89
EIF4B-201ENST00000262056 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.89
EIF4B-201ENST00000262056 IGHMBP2P38935 993 aaKnown RBP9.46□□□□□ -0.89
EIF4B-201ENST00000262056 NLRP3Q96P20 1036 aa9.46□□□□□ -0.89
EIF4B-201ENST00000262056 SRP68Q9UHB9 627 aaKnown RBP9.46□□□□□ -0.89
EIF4B-201ENST00000262056 OVOS2A0A0G2JMS6 1433 aa9.46□□□□□ -0.89
EIF4B-201ENST00000262056 SYCE3A1L190 88 aa9.46□□□□□ -0.9
EIF4B-201ENST00000262056 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
EIF4B-201ENST00000262056 RRP9O43818 475 aaKnown RBP9.46□□□□□ -0.9
EIF4B-201ENST00000262056 DTNBO60941 627 aa9.46□□□□□ -0.9
EIF4B-201ENST00000262056 CNBD1Q8NA66 436 aa9.46□□□□□ -0.9
EIF4B-201ENST00000262056 ANKIB1Q9P2G1 1089 aa9.46□□□□□ -0.9
EIF4B-201ENST00000262056 FSD2A1L4K1 749 aa9.46□□□□□ -0.9
EIF4B-201ENST00000262056 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.9
EIF4B-201ENST00000262056 NUCB1Q02818 461 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms