RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 M0R2N6 131 aa6.29□□□□□ -1.4
CDRT1-201ENST00000261644 GATA4P43694 442 aa6.29□□□□□ -1.4
CDRT1-201ENST00000261644 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
CDRT1-201ENST00000261644 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
CDRT1-201ENST00000261644 SYT9Q86SS6 491 aa6.29□□□□□ -1.4
CDRT1-201ENST00000261644 PLEKHM2Q8IWE5 1019 aa6.29□□□□□ -1.4
CDRT1-201ENST00000261644 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
CDRT1-201ENST00000261644 SKIP12755 728 aa6.28□□□□□ -1.4
CDRT1-201ENST00000261644 NCOA4Q13772 614 aa6.28□□□□□ -1.4
CDRT1-201ENST00000261644 TRIM50Q86XT4 487 aa6.28□□□□□ -1.4
CDRT1-201ENST00000261644 SLC9A9Q8IVB4 645 aa6.28□□□□□ -1.4
CDRT1-201ENST00000261644 USP17L5A8MUK1 530 aa6.27□□□□□ -1.41
CDRT1-201ENST00000261644 PSMA6P60900 246 aaKnown RBP6.27□□□□□ -1.41
CDRT1-201ENST00000261644 PRRT3Q5FWE3 981 aa6.27□□□□□ -1.41
CDRT1-201ENST00000261644 NKAPLQ5M9Q1 402 aa6.27□□□□□ -1.41
CDRT1-201ENST00000261644 WWC1Q8IX03 1113 aa6.27□□□□□ -1.41
CDRT1-201ENST00000261644 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDRT1-201ENST00000261644 EFCC1Q9HA90 598 aa6.27□□□□□ -1.41
CDRT1-201ENST00000261644 SERTM1A2A2V5 107 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 ATP1A2P50993 1020 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 NEUROD1Q13562 356 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
CDRT1-201ENST00000261644 LRRC69Q6ZNQ3 347 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 NACC1Q96RE7 527 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 ANKIB1Q9P2G1 1089 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 PARP3Q9Y6F1 533 aa6.26□□□□□ -1.41
CDRT1-201ENST00000261644 PSME1Q06323 249 aa6.25□□□□□ -1.41
CDRT1-201ENST00000261644 STAG2Q8N3U4 1231 aa6.25□□□□□ -1.41
CDRT1-201ENST00000261644 STARD13Q9Y3M8 1113 aa6.25□□□□□ -1.41
CDRT1-201ENST00000261644 M0R082 166 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 NID1P14543 1247 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 SPEM2Q0P670 501 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 DOC2BQ14184 412 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 C20orf204Q6ZNR8 217 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 MICALL1Q8N3F8 863 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 ZNF417Q8TAU3 575 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 RHPN1Q8TCX5 695 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 ZNF587Q96SQ5 575 aaPredicted RBP6.24□□□□□ -1.41
CDRT1-201ENST00000261644 SLC30A3Q99726 388 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 SEMA6BQ9H3T3 888 aa6.24□□□□□ -1.41
CDRT1-201ENST00000261644 ZBTB7BO15156 539 aaPredicted RBP6.23□□□□□ -1.41
CDRT1-201ENST00000261644 APBA3O96018 575 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 ADH7P40394 386 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 TYRO3Q06418 890 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 SFSWAPQ12872 951 aaKnown RBP6.23□□□□□ -1.41
CDRT1-201ENST00000261644 TNS4Q8IZW8 715 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 SIX5Q8N196 739 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 LARGE2Q8N3Y3 721 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 NEUROD4Q9HD90 331 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 ZNF232Q9UNY5 417 aa6.23□□□□□ -1.41
CDRT1-201ENST00000261644 ALBP02768 609 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 HIF1AQ16665 826 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 ZMYM1Q5SVZ6 1142 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 TPCN2Q8NHX9 752 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 GAS2L2Q8NHY3 880 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 BRD7Q9NPI1 651 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 TPSG1Q9NRR2 321 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 CHMP3Q9Y3E7 222 aa6.22□□□□□ -1.41
CDRT1-201ENST00000261644 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
CDRT1-201ENST00000261644 DYRK3O43781 588 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 CLDN10P78369 228 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 SH3PXD2AQ5TCZ1 1133 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 CCDC102BQ68D86 513 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 TSPAN10Q9H1Z9 355 aaPredicted RBP6.21□□□□□ -1.42
CDRT1-201ENST00000261644 KIAA1024Q9UPX6 916 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 KCNH4Q9UQ05 1017 aa6.21□□□□□ -1.42
CDRT1-201ENST00000261644 ATP9BO43861 1147 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 DKK1O94907 266 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 H2AFB1P0C5Y9 115 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 H2AFB2P0C5Z0 115 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 TRIM28Q13263 835 aaKnown RBP6.2□□□□□ -1.42
CDRT1-201ENST00000261644 IER5Q5VY09 327 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 ILDR2Q71H61 639 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 ADAMTS19Q8TE59 1207 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 UCN2Q96RP3 112 aa6.2□□□□□ -1.42
CDRT1-201ENST00000261644 C9orf172C9J069 976 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 ELNP15502 786 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 FLIIQ13045 1269 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 ADGRE1Q14246 886 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 DEPDC4Q8N2C3 294 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 SUSD3Q96L08 255 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 CEP63Q96MT8 703 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 PSMG3-AS1Q96PY0 264 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 PHACTR1Q9C0D0 580 aa6.19□□□□□ -1.42
CDRT1-201ENST00000261644 ZCCHC6Q5VYS8 1495 aaKnown RBP6.19□□□□□ -1.42
CDRT1-201ENST00000261644 RAD21O60216 631 aa6.18□□□□□ -1.42
CDRT1-201ENST00000261644 LILRB5O75023 590 aa6.18□□□□□ -1.42
CDRT1-201ENST00000261644 FOXD4L6Q3SYB3 417 aaPredicted RBP6.18□□□□□ -1.42
CDRT1-201ENST00000261644 TBCELQ5QJ74 424 aa6.18□□□□□ -1.42
CDRT1-201ENST00000261644 FOXD4L3Q6VB84 417 aaPredicted RBP6.18□□□□□ -1.42
CDRT1-201ENST00000261644 OGFOD1Q8N543 542 aa6.18□□□□□ -1.42
CDRT1-201ENST00000261644 HSH2DQ96JZ2 352 aa6.18□□□□□ -1.42
CDRT1-201ENST00000261644 C11orf16Q9NQ32 467 aa6.18□□□□□ -1.42
CDRT1-201ENST00000261644 CCDC180Q9P1Z9 1646 aa6.17□□□□□ -1.42
CDRT1-201ENST00000261644 C21orf2O43822 256 aa6.17□□□□□ -1.42
CDRT1-201ENST00000261644 NRG1Q02297 640 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms