RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 ZSCAN23Q3MJ62 389 aa23.32■■□□□ 1.32
LPCAT3-201ENST00000261407 KLHDC4Q8TBB5 520 aa23.32■■□□□ 1.32
LPCAT3-201ENST00000261407 IL17RAQ96F46 866 aa23.32■■□□□ 1.32
LPCAT3-201ENST00000261407 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
LPCAT3-201ENST00000261407 GRM8O00222 908 aa23.31■■□□□ 1.32
LPCAT3-201ENST00000261407 DTNBO60941 627 aa23.31■■□□□ 1.32
LPCAT3-201ENST00000261407 RAPGEF4Q8WZA2 1011 aa23.31■■□□□ 1.32
LPCAT3-201ENST00000261407 BRD1O95696 1058 aa23.31■■□□□ 1.32
LPCAT3-201ENST00000261407 CHRNA2Q15822 529 aa23.31■■□□□ 1.32
LPCAT3-201ENST00000261407 LINS1Q8NG48 757 aa23.31■■□□□ 1.32
LPCAT3-201ENST00000261407 SASH1O94885 1247 aa23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 JARID2Q92833 1246 aaPredicted RBP23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 KDM6AO15550 1401 aaPredicted RBP23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 GLRX3O76003 335 aaKnown RBP23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 AACSQ86V21 672 aa23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 SIL1Q9H173 461 aa23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 SLC52A2Q9HAB3 445 aa23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 USP42Q9H9J4 1324 aaKnown RBP23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 OVOS2A0A0G2JMS6 1433 aa23.3■■□□□ 1.32
LPCAT3-201ENST00000261407 NPHP3Q7Z494 1330 aa23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 PTH1RQ03431 593 aa23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 TTC41PQ6P2S7 1318 aa23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 ZNF496Q96IT1 587 aaPredicted RBP23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 CCDC8Q9H0W5 538 aaPredicted RBP23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 ECHDC1Q9NTX5 307 aa23.29■■□□□ 1.32
LPCAT3-201ENST00000261407 SIPA1L3O60292 1781 aaPredicted RBP23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 CAMTA1Q9Y6Y1 1673 aa23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 PHKG2P15735 406 aa23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 EAF2Q96CJ1 260 aaPredicted RBP23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 TLR7Q9NYK1 1049 aaKnown RBP23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 XAGE3Q8WTP9 111 aa23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 INTS4Q96HW7 963 aaKnown RBP23.28■■□□□ 1.32
LPCAT3-201ENST00000261407 NASPP49321 788 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-201ENST00000261407 COPS6Q7L5N1 327 aa23.27■■□□□ 1.32
LPCAT3-201ENST00000261407 TMEM63CQ9P1W3 806 aa23.27■■□□□ 1.32
LPCAT3-201ENST00000261407 USP16Q9Y5T5 823 aa23.27■■□□□ 1.32
LPCAT3-201ENST00000261407 MEGF6O75095 1541 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 EPHA10Q5JZY3 1008 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 DIAPH3Q9NSV4 1193 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 PRIM1P49642 420 aaKnown RBP23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 AK2P54819 239 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 ZNF445P59923 1031 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 KIAA1211Q6ZU35 1233 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 TTC14Q96N46 770 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 GDPD2Q9HCC8 539 aa23.26■■□□□ 1.31
LPCAT3-201ENST00000261407 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-201ENST00000261407 TATP17735 454 aaPredicted RBP23.25■■□□□ 1.31
LPCAT3-201ENST00000261407 ATF3P18847 181 aa23.25■■□□□ 1.31
LPCAT3-201ENST00000261407 ADCK5Q3MIX3 580 aa23.25■■□□□ 1.31
LPCAT3-201ENST00000261407 MYD88Q99836 296 aa23.25■■□□□ 1.31
LPCAT3-201ENST00000261407 UTYO14607 1347 aa23.24■■□□□ 1.31
LPCAT3-201ENST00000261407 RUFY3Q7L099 469 aa23.24■■□□□ 1.31
LPCAT3-201ENST00000261407 NEURL1BA8MQ27 555 aa23.24■■□□□ 1.31
LPCAT3-201ENST00000261407 CYP27B1O15528 508 aa23.24■■□□□ 1.31
LPCAT3-201ENST00000261407 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
LPCAT3-201ENST00000261407 RBSNQ9H1K0 784 aa23.24■■□□□ 1.31
LPCAT3-201ENST00000261407 TMEM94Q12767 1356 aa23.23■■□□□ 1.31
LPCAT3-201ENST00000261407 COL9A3Q14050 684 aaPredicted RBP23.23■■□□□ 1.31
LPCAT3-201ENST00000261407 FAM227BQ96M60 508 aa23.23■■□□□ 1.31
LPCAT3-201ENST00000261407 C5P01031 1676 aa23.23■■□□□ 1.31
LPCAT3-201ENST00000261407 CASTP20810 708 aaKnown RBP23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 G3BP1Q13283 466 aaKnown RBP eCLIP23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 PRPF40BQ6NWY9 871 aaKnown RBP23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 LARGE1O95461 756 aa23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 ERC1Q8IUD2 1116 aa23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 MST1RQ04912 1400 aa23.22■■□□□ 1.31
LPCAT3-201ENST00000261407 SYCE3A1L190 88 aa23.21■■□□□ 1.31
LPCAT3-201ENST00000261407 GCKRQ14397 625 aa23.21■■□□□ 1.31
LPCAT3-201ENST00000261407 BOLA2Q9H3K6 86 aa23.21■■□□□ 1.31
LPCAT3-201ENST00000261407 LARP1Q6PKG0 1096 aaKnown RBP23.21■■□□□ 1.31
LPCAT3-201ENST00000261407 LRP10Q7Z4F1 713 aa23.21■■□□□ 1.31
LPCAT3-201ENST00000261407 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
LPCAT3-201ENST00000261407 RPAP1Q9BWH6 1393 aaPredicted RBP23.2■■□□□ 1.3
LPCAT3-201ENST00000261407 GADD45BO75293 160 aaPredicted RBP23.2■■□□□ 1.3
LPCAT3-201ENST00000261407 GPATCH3Q96I76 525 aa23.2■■□□□ 1.3
LPCAT3-201ENST00000261407 ESPNB1AK53 854 aa23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 EVI5LQ96CN4 794 aa23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 TRIM44Q96DX7 344 aaPredicted RBP23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 ANKRD13DQ6ZTN6 518 aa23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 EDC3Q96F86 508 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 METTL22Q9BUU2 404 aaPredicted RBP23.19■■□□□ 1.3
LPCAT3-201ENST00000261407 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 PTCD1O75127 700 aaKnown RBP23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 CLCN1P35523 988 aa23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 NEXNQ0ZGT2 675 aa23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 NMIQ13287 307 aaPredicted RBP23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 SCN11AQ9UI33 1791 aa23.18■■□□□ 1.3
LPCAT3-201ENST00000261407 TPRNQ4KMQ1 711 aa23.17■■□□□ 1.3
LPCAT3-201ENST00000261407 LIMCH1Q9UPQ0 1083 aa23.17■■□□□ 1.3
LPCAT3-201ENST00000261407 HDAC5Q9UQL6 1122 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms