RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 VPS37CA5D8V6 355 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-201ENST00000258607 ST18O60284 1047 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 REC8O95072 547 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 WWC3Q9ULE0 1092 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 JAG2Q9Y219 1238 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 KSR2Q6VAB6 950 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-201ENST00000258607 USP31Q70CQ4 1352 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 TECPR2O15040 1411 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 CASTP20810 708 aaKnown RBP11.05□□□□□ -0.64
CKAP2-201ENST00000258607 FAM173BQ6P4H8 233 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 USP26Q9BXU7 913 aa11.05□□□□□ -0.64
CKAP2-201ENST00000258607 HAND2P61296 217 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 TFCP2Q12800 502 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 EAF2Q96CJ1 260 aaPredicted RBP11.04□□□□□ -0.64
CKAP2-201ENST00000258607 TMOD3Q9NYL9 352 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 PI16Q6UXB8 463 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
CKAP2-201ENST00000258607 KIF2CQ99661 725 aa11.04□□□□□ -0.64
CKAP2-201ENST00000258607 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
CKAP2-201ENST00000258607 FMNL2Q96PY5 1086 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
CKAP2-201ENST00000258607 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
CKAP2-201ENST00000258607 AAMPQ13685 434 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 GOLIM4O00461 696 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 MCCP23508 829 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 CHMLP26374 656 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 DBNDD2Q9BQY9 259 aa11.03□□□□□ -0.64
CKAP2-201ENST00000258607 ITSN1Q15811 1721 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 SNRPA1P09661 255 aaKnown RBP11.02□□□□□ -0.64
CKAP2-201ENST00000258607 PTH1RQ03431 593 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 WASHC4Q2M389 1173 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 RASEFQ8IZ41 740 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 ARID3AQ99856 593 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 ESYT1Q9BSJ8 1104 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 TOMM22Q9NS69 142 aa11.02□□□□□ -0.64
CKAP2-201ENST00000258607 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 FIBPO43427 364 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 TAF6LQ9Y6J9 622 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 PTCH1Q13635 1447 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 GTF2E1P29083 439 aaPredicted RBP11.02□□□□□ -0.65
CKAP2-201ENST00000258607 LRRC24Q50LG9 513 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 ATP10DQ9P241 1426 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 ADGRB2O60241 1585 aa11.02□□□□□ -0.65
CKAP2-201ENST00000258607 CNTROBQ8N137 903 aa11.01□□□□□ -0.65
CKAP2-201ENST00000258607 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
CKAP2-201ENST00000258607 ADCY9O60503 1353 aa11.01□□□□□ -0.65
CKAP2-201ENST00000258607 RGS12O14924 1447 aa11.01□□□□□ -0.65
CKAP2-201ENST00000258607 APPP05067 770 aa11.01□□□□□ -0.65
CKAP2-201ENST00000258607 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
CKAP2-201ENST00000258607 GUCY1B3Q02153 619 aa11.01□□□□□ -0.65
CKAP2-201ENST00000258607 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
CKAP2-201ENST00000258607 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 IL2RBP14784 551 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 TMX3Q96JJ7 454 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 GOLGA6L3A6NEY3 463 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 HYPKQ9NX55 129 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 NBPF26B4DH59 902 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 GOLGA6L22H0YM25 854 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 PHF14O94880 888 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 NBPF14Q5TI25 921 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
CKAP2-201ENST00000258607 NBPF15Q8N660 670 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 KDRP35968 1356 aa11□□□□□ -0.65
CKAP2-201ENST00000258607 NEURL1BA8MQ27 555 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 SASH1O94885 1247 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-201ENST00000258607 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 PCNTO95613 3336 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 SSH2Q76I76 1423 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 GCKRQ14397 625 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
CKAP2-201ENST00000258607 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 A0A0G2JLW4 131 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 KCNQ2O43526 872 aa10.99□□□□□ -0.65
CKAP2-201ENST00000258607 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 ECHDC1Q9NTX5 307 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 A0A0D9SFI3 127 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 TAF5LO75529 589 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 RABEP1Q15276 862 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 KAZALD1Q96I82 304 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 NGLY1Q96IV0 654 aa10.98□□□□□ -0.65
CKAP2-201ENST00000258607 CCT2P78371 535 aaKnown RBP10.97□□□□□ -0.65
CKAP2-201ENST00000258607 HLFQ16534 295 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 CNNM1Q9NRU3 951 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 SPATA31A3Q5VYP0 1347 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1137.4 ms