RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PDIA6Q15084 440 aa17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 EPHA10Q5JZY3 1008 aa17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 TTLL7Q6ZT98 887 aa17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 MARF1Q9Y4F3 1742 aaKnown RBP17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 SSFA2P28290 1259 aa17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 KCNJ4P48050 445 aa17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 GAS2L3Q86XJ1 694 aa17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 ZGPATQ8N5A5 531 aaKnown RBP17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 RGPD5Q99666 1765 aa17.8■□□□□ 0.44
TRAFD1-201ENST00000257604 ERBB4Q15303 1308 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 CHMLP26374 656 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 CHMP4AQ9BY43 222 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 TLR7Q9NYK1 1049 aaKnown RBP17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 CPA1P15085 419 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 ESYT1Q9BSJ8 1104 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 HOXB7P09629 217 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 PKP1Q13835 747 aa17.79■□□□□ 0.44
TRAFD1-201ENST00000257604 IL2RBP14784 551 aa17.78■□□□□ 0.44
TRAFD1-201ENST00000257604 TNPO1Q92973 898 aaKnown RBP17.78■□□□□ 0.44
TRAFD1-201ENST00000257604 DIAPH3Q9NSV4 1193 aa17.78■□□□□ 0.44
TRAFD1-201ENST00000257604 KDM6AO15550 1401 aaPredicted RBP17.78■□□□□ 0.44
TRAFD1-201ENST00000257604 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
TRAFD1-201ENST00000257604 ST18O60284 1047 aa17.77■□□□□ 0.44
TRAFD1-201ENST00000257604 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.44
TRAFD1-201ENST00000257604 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.44
TRAFD1-201ENST00000257604 TRIM44Q96DX7 344 aaPredicted RBP17.77■□□□□ 0.44
TRAFD1-201ENST00000257604 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
TRAFD1-201ENST00000257604 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.43
TRAFD1-201ENST00000257604 MRE11P49959 708 aa17.77■□□□□ 0.43
TRAFD1-201ENST00000257604 RABEP1Q15276 862 aa17.76■□□□□ 0.43
TRAFD1-201ENST00000257604 DNAJC2Q99543 621 aaKnown RBP17.76■□□□□ 0.43
TRAFD1-201ENST00000257604 ASAP1Q9ULH1 1129 aa17.76■□□□□ 0.43
TRAFD1-201ENST00000257604 GPTP24298 496 aa17.76■□□□□ 0.43
TRAFD1-201ENST00000257604 KAZALD1Q96I82 304 aa17.76■□□□□ 0.43
TRAFD1-201ENST00000257604 GCKRQ14397 625 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 MCCP23508 829 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 CLCN1P35523 988 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 CNTROBQ8N137 903 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 ACSBG1Q96GR2 724 aa17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 ZNF594Q96JF6 807 aaPredicted RBP17.75■□□□□ 0.43
TRAFD1-201ENST00000257604 RAB11FIP3O75154 756 aa17.74■□□□□ 0.43
TRAFD1-201ENST00000257604 CHGBP05060 677 aa17.74■□□□□ 0.43
TRAFD1-201ENST00000257604 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
TRAFD1-201ENST00000257604 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
TRAFD1-201ENST00000257604 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
TRAFD1-201ENST00000257604 POLA2Q14181 598 aa17.74■□□□□ 0.43
TRAFD1-201ENST00000257604 NBPF26B4DH59 902 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 ALDH1L1O75891 902 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 NBPF15Q8N660 670 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 HSP90AB4PQ58FF6 505 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 DDX11L8A8MPP1 907 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 SASH1O94885 1247 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
TRAFD1-201ENST00000257604 ESPNB1AK53 854 aa17.72■□□□□ 0.43
TRAFD1-201ENST00000257604 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
TRAFD1-201ENST00000257604 SNX21Q969T3 373 aa17.72■□□□□ 0.43
TRAFD1-201ENST00000257604 PI4K2BQ8TCG2 481 aa17.72■□□□□ 0.43
TRAFD1-201ENST00000257604 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 PCDH11XQ9BZA7 1347 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 PCDH11YQ9BZA8 1340 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 TFCP2Q12800 502 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 GPATCH3Q96I76 525 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 FAM227BQ96M60 508 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 OSBPL3Q9H4L5 887 aa17.71■□□□□ 0.43
TRAFD1-201ENST00000257604 SYNE4Q8N205 404 aa17.71■□□□□ 0.42
TRAFD1-201ENST00000257604 STRCP1A6NGW2 1772 aa17.7■□□□□ 0.42
TRAFD1-201ENST00000257604 SLFNL1Q499Z3 407 aa17.7■□□□□ 0.42
TRAFD1-201ENST00000257604 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
TRAFD1-201ENST00000257604 SLIT3O75094 1523 aa17.69■□□□□ 0.42
TRAFD1-201ENST00000257604 GLRX3O76003 335 aaKnown RBP17.69■□□□□ 0.42
TRAFD1-201ENST00000257604 TIMM10P62072 90 aa17.69■□□□□ 0.42
TRAFD1-201ENST00000257604 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
TRAFD1-201ENST00000257604 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
TRAFD1-201ENST00000257604 MPNDQ8N594 471 aa17.69■□□□□ 0.42
TRAFD1-201ENST00000257604 SALL3Q9BXA9 1300 aa17.68■□□□□ 0.42
TRAFD1-201ENST00000257604 DDX46Q7L014 1031 aaKnown RBP17.68■□□□□ 0.42
TRAFD1-201ENST00000257604 GBP4Q96PP9 640 aa17.68■□□□□ 0.42
TRAFD1-201ENST00000257604 AK9Q5TCS8 1911 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 KCNQ4P56696 695 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 TMX3Q96JJ7 454 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.424e-6■□□□□ 11.2
TRAFD1-201ENST00000257604 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 PTH1RQ03431 593 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 STAP2Q9UGK3 403 aa17.67■□□□□ 0.42
TRAFD1-201ENST00000257604 PIGBQ92521 554 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms