RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 ARHGAP31Q2M1Z3 1444 aa11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 MROH2AA6NES4 1674 aa11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 DTNBO60941 627 aa11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 APPP05067 770 aa11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 ZNF771Q7L3S4 317 aaPredicted RBP11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 FMNL2Q96PY5 1086 aa11.92□□□□□ -0.5
SEMA6A-201ENST00000257414 SGSM2O43147 1006 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 AMOTQ4VCS5 1084 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 TRDNQ13061 729 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 DEPDC5O75140 1603 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 HOXC9P31274 260 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 RAD50Q92878 1312 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 STK38Q15208 465 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 CCDC112Q8NEF3 446 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 MYD88Q99836 296 aa11.91□□□□□ -0.5
SEMA6A-201ENST00000257414 AOX1Q06278 1338 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 HSPA4P34932 840 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 USP44Q9H0E7 712 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 ARHGEF10O15013 1369 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 PRIMPOLQ96LW4 560 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 PRDM10Q9NQV6 1147 aa11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 DDX19AQ9NUU7 478 aaKnown RBP11.9□□□□□ -0.5
SEMA6A-201ENST00000257414 SMC2O95347 1197 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 TRIM29Q14134 588 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 NEXMIFQ5QGS0 1516 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 NEURL4Q96JN8 1562 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 CCDC34Q96HJ3 373 aa11.89□□□□□ -0.51
SEMA6A-201ENST00000257414 PTPRMP28827 1452 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 VPS53Q5VIR6 699 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 KSR2Q6VAB6 950 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 GRM8O00222 908 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 KDM4AO75164 1064 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 ZNF165P49910 485 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 CREB3L3Q68CJ9 461 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 CEP57L1Q8IYX8 460 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 FAM200AQ8TCP9 573 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 SSH3Q8TE77 659 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 SIRT1Q96EB6 747 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 C16orf45Q96MC5 204 aaPredicted RBP11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 DACT1Q9NYF0 836 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 CAMSAP1Q5T5Y3 1602 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
SEMA6A-201ENST00000257414 NFXL1Q6ZNB6 911 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 JARID2Q92833 1246 aaPredicted RBP11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 DDIT3P35638 169 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 CBX1P83916 185 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 CLIP2Q9UDT6 1046 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 NCOA3Q9Y6Q9 1424 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 GUCY1B3Q02153 619 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 CUL4AQ13619 759 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 CCDC171Q6TFL3 1326 aa11.87□□□□□ -0.51
SEMA6A-201ENST00000257414 NPHP1O15259 732 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 STAP2Q9UGK3 403 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 RGS12O14924 1447 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 TERF1P54274 439 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 ANO6Q4KMQ2 910 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 RUFY3Q7L099 469 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 CABP4P57796 275 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 ANKLE2Q86XL3 938 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 C17orf53Q8N3J3 647 aaPredicted RBP11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 TYRO3Q06418 890 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 CCAR2Q8N163 923 aaKnown RBP11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 LINS1Q8NG48 757 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms