RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 RNF17Q9BXT8 1623 aaKnown RBP10.97□□□□□ -0.65
PDE6A-201ENST00000255266 INSRP06213 1382 aa10.97□□□□□ -0.65
PDE6A-201ENST00000255266 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 MCM2P49736 904 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 TNIP1Q15025 636 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 CEP89Q96ST8 783 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 C1orf115Q9H7X2 142 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 KIAA0232Q92628 1395 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 CEP170BQ9Y4F5 1589 aaPredicted RBP10.96□□□□□ -0.65
PDE6A-201ENST00000255266 NCOA3Q9Y6Q9 1424 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 PLCG2P16885 1265 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 TRAF1Q13077 416 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 ZNF444Q8N0Y2 327 aaPredicted RBP10.96□□□□□ -0.65
PDE6A-201ENST00000255266 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 CHPF2Q9P2E5 772 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 MAST3O60307 1309 aa10.96□□□□□ -0.65
PDE6A-201ENST00000255266 ABCA6Q8N139 1617 aa10.96□□□□□ -0.66
PDE6A-201ENST00000255266 SEPT12Q8IYM1 358 aa10.96□□□□□ -0.66
PDE6A-201ENST00000255266 WASF1Q92558 559 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 ARHGAP45Q92619 1136 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 FER1L4A9Z1Z3 1794 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 TMEM132AQ24JP5 1023 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 SPATA31E1Q6ZUB1 1445 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 DIP2AQ14689 1571 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 BCAR3O75815 825 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 UBE3BQ7Z3V4 1068 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 ANKRD20A12PQ8NF67 263 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
PDE6A-201ENST00000255266 USP6P35125 1406 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 ZNF790Q6PG37 636 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 PI4KAP2A4QPH2 592 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 PI4KAP1Q8N8J0 262 aa10.95□□□□□ -0.66
PDE6A-201ENST00000255266 CRNKL1Q9BZJ0 848 aaKnown RBP10.95□□□□□ -0.66
PDE6A-201ENST00000255266 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
PDE6A-201ENST00000255266 AEBP1Q8IUX7 1158 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 TXLNAP40222 546 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 CDK5RAP3Q96JB5 506 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 PLBD2Q8NHP8 589 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 FEZ1Q99689 392 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
PDE6A-201ENST00000255266 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
PDE6A-201ENST00000255266 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
PDE6A-201ENST00000255266 PTCH1Q13635 1447 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 IL15P40933 162 aaPredicted RBP10.93□□□□□ -0.66
PDE6A-201ENST00000255266 CUL5Q93034 780 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 IL13P35225 146 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 CERS3Q8IU89 383 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 NAPBQ9H115 298 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 ALKQ9UM73 1620 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 FAM83GA6ND36 823 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 TMEM57Q8N5G2 664 aa10.93□□□□□ -0.66
PDE6A-201ENST00000255266 DDX21Q9NR30 783 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDE6A-201ENST00000255266 NOL7Q9UMY1 257 aaKnown RBP10.93□□□□□ -0.66
PDE6A-201ENST00000255266 LRRFIP2Q9Y608 721 aaKnown RBP10.93□□□□□ -0.66
PDE6A-201ENST00000255266 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
PDE6A-201ENST00000255266 LINS1Q8NG48 757 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
PDE6A-201ENST00000255266 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
PDE6A-201ENST00000255266 PARD3Q8TEW0 1356 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 PDE4BQ07343 736 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 NIM1KQ8IY84 436 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 CNKSR1Q969H4 720 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 CYP46A1Q9Y6A2 500 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 CPS1P31327 1500 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 OVOS2A0A0G2JMS6 1433 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 GRM8O00222 908 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 TRIM37O94972 964 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 TPM1P09493 284 aa10.92□□□□□ -0.66
PDE6A-201ENST00000255266 RARSP54136 660 aaKnown RBP10.92□□□□□ -0.66
PDE6A-201ENST00000255266 CLTCL1P53675 1640 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 SH3TC1Q8TE82 1336 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 B4DLN1 442 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 PHKG2P15735 406 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 PDCP20941 246 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
PDE6A-201ENST00000255266 ARHGEF25Q86VW2 580 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 CHD1LQ86WJ1 897 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 ZNF76P36508 570 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
PDE6A-201ENST00000255266 GGA1Q9UJY5 639 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 TULP4Q9NRJ4 1543 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
PDE6A-201ENST00000255266 ZFYP08048 801 aaPredicted RBP10.9□□□□□ -0.66
PDE6A-201ENST00000255266 CCDC191Q8NCU4 936 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 PDE8AO60658 829 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 FBLN1P23142 703 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 ATP2B3Q16720 1220 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 TMC4Q7Z404 712 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 CCDC196A0A1B0GTZ2 297 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 MX1P20591 662 aa10.9□□□□□ -0.66
PDE6A-201ENST00000255266 DPP8Q6V1X1 898 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms