RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 COL5A3P25940 1745 aaPredicted RBP17.69■□□□□ 0.42
SDF2-201ENST00000247020 SBF2Q86WG5 1849 aa17.69■□□□□ 0.42
SDF2-201ENST00000247020 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
SDF2-201ENST00000247020 NEURL1BA8MQ27 555 aa17.68■□□□□ 0.42
SDF2-201ENST00000247020 A1BGP04217 495 aa17.68■□□□□ 0.42
SDF2-201ENST00000247020 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
SDF2-201ENST00000247020 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
SDF2-201ENST00000247020 GRM8O00222 908 aa17.67■□□□□ 0.42
SDF2-201ENST00000247020 IGKV5-2P06315 115 aa17.67■□□□□ 0.42
SDF2-201ENST00000247020 NBPF7P0C2Y1 421 aaPredicted RBP17.67■□□□□ 0.42
SDF2-201ENST00000247020 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
SDF2-201ENST00000247020 CYP19A1P11511 503 aaPredicted RBP17.66■□□□□ 0.42
SDF2-201ENST00000247020 CWF19L2Q2TBE0 894 aaKnown RBP17.66■□□□□ 0.42
SDF2-201ENST00000247020 BTAF1O14981 1849 aa17.66■□□□□ 0.42
SDF2-201ENST00000247020 POLA2Q14181 598 aa17.66■□□□□ 0.42
SDF2-201ENST00000247020 GCKRQ14397 625 aa17.66■□□□□ 0.42
SDF2-201ENST00000247020 SLC4A9Q96Q91 983 aa17.66■□□□□ 0.42
SDF2-201ENST00000247020 MYD88Q99836 296 aa17.66■□□□□ 0.42
SDF2-201ENST00000247020 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
SDF2-201ENST00000247020 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
SDF2-201ENST00000247020 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
SDF2-201ENST00000247020 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
SDF2-201ENST00000247020 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
SDF2-201ENST00000247020 C8orf34Q49A92 452 aa17.64■□□□□ 0.41
SDF2-201ENST00000247020 A0A0G2JS52 829 aa17.63■□□□□ 0.41
SDF2-201ENST00000247020 IL6STP40189 918 aaPredicted RBP17.63■□□□□ 0.41
SDF2-201ENST00000247020 MYT1Q01538 1121 aa17.63■□□□□ 0.41
SDF2-201ENST00000247020 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
SDF2-201ENST00000247020 LY75O60449 1722 aa17.63■□□□□ 0.41
SDF2-201ENST00000247020 LOC102724428A0A0B4J2F2 783 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 SIK1P57059 783 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 NUP98P52948 1817 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
SDF2-201ENST00000247020 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
SDF2-201ENST00000247020 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
SDF2-201ENST00000247020 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
SDF2-201ENST00000247020 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
SDF2-201ENST00000247020 QTRT2Q9H974 415 aaKnown RBP17.6■□□□□ 0.41
SDF2-201ENST00000247020 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
SDF2-201ENST00000247020 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
SDF2-201ENST00000247020 MAP3K15Q6ZN16 1313 aa17.6■□□□□ 0.41
SDF2-201ENST00000247020 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 TCIRG1Q13488 830 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 BMP2KLQ5H9B9 411 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 SUCLG2Q96I99 432 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 CCDC87Q9NVE4 849 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
SDF2-201ENST00000247020 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
SDF2-201ENST00000247020 BCORQ6W2J9 1755 aa17.58■□□□□ 0.41
SDF2-201ENST00000247020 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.41
SDF2-201ENST00000247020 KCNQ2O43526 872 aa17.58■□□□□ 0.41
SDF2-201ENST00000247020 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.41
SDF2-201ENST00000247020 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.41
SDF2-201ENST00000247020 H7C1W4 665 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 CASP7P55210 303 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 ZBTB3Q9H5J0 574 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 A0A087WZG4 1122 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 RABL6Q3YEC7 729 aaPredicted RBP17.57■□□□□ 0.4
SDF2-201ENST00000247020 PLEKHM2Q8IWE5 1019 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 OSBPL3Q9H4L5 887 aa17.57■□□□□ 0.4
SDF2-201ENST00000247020 BICC1Q9H694 974 aaKnown RBP17.57■□□□□ 0.4
SDF2-201ENST00000247020 TUBGCP6Q96RT7 1819 aa17.56■□□□□ 0.4
SDF2-201ENST00000247020 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
SDF2-201ENST00000247020 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
SDF2-201ENST00000247020 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
SDF2-201ENST00000247020 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
SDF2-201ENST00000247020 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
SDF2-201ENST00000247020 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
SDF2-201ENST00000247020 SURF6O75683 361 aaKnown RBP17.55■□□□□ 0.4
SDF2-201ENST00000247020 ITPK1Q13572 414 aa17.55■□□□□ 0.4
SDF2-201ENST00000247020 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
SDF2-201ENST00000247020 MYH3P11055 1940 aa17.54■□□□□ 0.4
SDF2-201ENST00000247020 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
SDF2-201ENST00000247020 RGL2O15211 777 aa17.54■□□□□ 0.4
SDF2-201ENST00000247020 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
SDF2-201ENST00000247020 AOX1Q06278 1338 aa17.53■□□□□ 0.4
SDF2-201ENST00000247020 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
SDF2-201ENST00000247020 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
SDF2-201ENST00000247020 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
SDF2-201ENST00000247020 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
SDF2-201ENST00000247020 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
SDF2-201ENST00000247020 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
SDF2-201ENST00000247020 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
SDF2-201ENST00000247020 SCN7AQ01118 1682 aa17.52■□□□□ 0.4
SDF2-201ENST00000247020 CDHR2Q9BYE9 1310 aa17.52■□□□□ 0.4
SDF2-201ENST00000247020 SMARCA5O60264 1052 aaPredicted RBP17.52■□□□□ 0.39
SDF2-201ENST00000247020 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.39
SDF2-201ENST00000247020 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.39
SDF2-201ENST00000247020 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
SDF2-201ENST00000247020 FAM196AQ6ZSG2 479 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms