RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 TMEM94Q12767 1356 aa31.93■■■□□ 2.7
RTN2-201ENST00000245923 PHKG2P15735 406 aa31.93■■■□□ 2.7
RTN2-201ENST00000245923 SPG7Q9UQ90 795 aa31.93■■■□□ 2.7
RTN2-201ENST00000245923 MEGF6O75095 1541 aa31.92■■■□□ 2.7
RTN2-201ENST00000245923 KAZALD1Q96I82 304 aa31.91■■■□□ 2.7
RTN2-201ENST00000245923 LSG1Q9H089 658 aaKnown RBP31.91■■■□□ 2.7
RTN2-201ENST00000245923 SUCLG2Q96I99 432 aa31.9■■■□□ 2.7
RTN2-201ENST00000245923 MRC1P22897 1456 aa31.9■■■□□ 2.7
RTN2-201ENST00000245923 SLC39A6Q13433 755 aa31.89■■■□□ 2.7
RTN2-201ENST00000245923 ECHDC1Q9NTX5 307 aa31.89■■■□□ 2.7
RTN2-201ENST00000245923 PA2G4Q9UQ80 394 aaKnown RBP31.89■■■□□ 2.7
RTN2-201ENST00000245923 UPF3BQ9BZI7 483 aaKnown RBP31.88■■■□□ 2.69
RTN2-201ENST00000245923 PKD1L3Q7Z443 1732 aa31.88■■■□□ 2.69
RTN2-201ENST00000245923 AIMP1Q12904 312 aaKnown RBP31.88■■■□□ 2.69
RTN2-201ENST00000245923 IFNL2Q8IZJ0 200 aa31.88■■■□□ 2.69
RTN2-201ENST00000245923 DDX17Q92841 729 aaKnown RBP31.88■■■□□ 2.69
RTN2-201ENST00000245923 LARP1Q6PKG0 1096 aaKnown RBP31.87■■■□□ 2.69
RTN2-201ENST00000245923 NFATC2IPQ8NCF5 419 aa31.87■■■□□ 2.69
RTN2-201ENST00000245923 GPATCH3Q96I76 525 aa31.87■■■□□ 2.69
RTN2-201ENST00000245923 TNS3Q68CZ2 1445 aa31.87■■■□□ 2.69
RTN2-201ENST00000245923 IGKV5-2P06315 115 aa31.87■■■□□ 2.69
RTN2-201ENST00000245923 BICC1Q9H694 974 aaKnown RBP31.86■■■□□ 2.69
RTN2-201ENST00000245923 BRD1O95696 1058 aa31.86■■■□□ 2.69
RTN2-201ENST00000245923 RIC3Q7Z5B4 369 aa31.86■■■□□ 2.69
RTN2-201ENST00000245923 IFIT2P09913 472 aaKnown RBP31.85■■■□□ 2.69
RTN2-201ENST00000245923 SNX14Q9Y5W7 946 aa31.85■■■□□ 2.69
RTN2-201ENST00000245923 CWC27Q6UX04 472 aaKnown RBP31.84■■■□□ 2.69
RTN2-201ENST00000245923 KIAA1211Q6ZU35 1233 aa31.83■■■□□ 2.69
RTN2-201ENST00000245923 RUFY2Q8WXA3 655 aa31.83■■■□□ 2.69
RTN2-201ENST00000245923 DCAF5Q96JK2 942 aa31.83■■■□□ 2.69
RTN2-201ENST00000245923 ZNF445P59923 1031 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 ZNF496Q96IT1 587 aaPredicted RBP31.82■■■□□ 2.68
RTN2-201ENST00000245923 NEURL1BA8MQ27 555 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 SASH1O94885 1247 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 CSB-PGBD3P0DP91 1061 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 NEXNQ0ZGT2 675 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 CADPS2Q86UW7 1296 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 DIAPH3Q9NSV4 1193 aa31.82■■■□□ 2.68
RTN2-201ENST00000245923 PRPF40AO75400 957 aaKnown RBP31.81■■■□□ 2.68
RTN2-201ENST00000245923 NOL8Q76FK4 1167 aaKnown RBP31.81■■■□□ 2.68
RTN2-201ENST00000245923 AACSQ86V21 672 aa31.81■■■□□ 2.68
RTN2-201ENST00000245923 XAGE3Q8WTP9 111 aa31.81■■■□□ 2.68
RTN2-201ENST00000245923 METTL22Q9BUU2 404 aaPredicted RBP31.8■■■□□ 2.68
RTN2-201ENST00000245923 MYL6BP14649 208 aa31.8■■■□□ 2.68
RTN2-201ENST00000245923 G3BP1Q13283 466 aaKnown RBP eCLIP31.8■■■□□ 2.68
RTN2-201ENST00000245923 LRP10Q7Z4F1 713 aa31.8■■■□□ 2.68
RTN2-201ENST00000245923 CABLES1Q8TDN4 633 aa31.8■■■□□ 2.68
RTN2-201ENST00000245923 EVI5LQ96CN4 794 aa31.8■■■□□ 2.68
RTN2-201ENST00000245923 TTC14Q96N46 770 aa31.8■■■□□ 2.68
RTN2-201ENST00000245923 COPS6Q7L5N1 327 aa31.79■■■□□ 2.68
RTN2-201ENST00000245923 RRAGDQ9NQL2 400 aaPredicted RBP31.79■■■□□ 2.68
RTN2-201ENST00000245923 CPDO75976 1380 aa31.79■■■□□ 2.68
RTN2-201ENST00000245923 CYP27B1O15528 508 aa31.79■■■□□ 2.68
RTN2-201ENST00000245923 SNRPA1P09661 255 aaKnown RBP31.79■■■□□ 2.68
RTN2-201ENST00000245923 GCKRQ14397 625 aa31.79■■■□□ 2.68
RTN2-201ENST00000245923 RASEFQ8IZ41 740 aa31.78■■■□□ 2.68
RTN2-201ENST00000245923 CAVIN1Q6NZI2 390 aaKnown RBP31.78■■■□□ 2.68
RTN2-201ENST00000245923 SPATA31A3Q5VYP0 1347 aa31.78■■■□□ 2.68
RTN2-201ENST00000245923 PARP4Q9UKK3 1724 aaKnown RBP31.77■■■□□ 2.68
RTN2-201ENST00000245923 GPT2Q8TD30 523 aa31.77■■■□□ 2.68
RTN2-201ENST00000245923 CHRNA2Q15822 529 aa31.77■■■□□ 2.68
RTN2-201ENST00000245923 EAF2Q96CJ1 260 aaPredicted RBP31.77■■■□□ 2.68
RTN2-201ENST00000245923 ZSCAN23Q3MJ62 389 aa31.76■■■□□ 2.67
RTN2-201ENST00000245923 TTC5Q8N0Z6 440 aa31.76■■■□□ 2.67
RTN2-201ENST00000245923 NCLP19338 710 aaKnown RBP31.75■■■□□ 2.67
RTN2-201ENST00000245923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.75■■■□□ 2.67
RTN2-201ENST00000245923 FMNL2Q96PY5 1086 aa31.75■■■□□ 2.67
RTN2-201ENST00000245923 MYD88Q99836 296 aa31.75■■■□□ 2.67
RTN2-201ENST00000245923 USP16Q9Y5T5 823 aa31.75■■■□□ 2.67
RTN2-201ENST00000245923 LAMB4A4D0S4 1761 aa31.75■■■□□ 2.67
RTN2-201ENST00000245923 AFDNP55196 1824 aaKnown RBP31.75■■■□□ 2.67
RTN2-201ENST00000245923 ANKRD13DQ6ZTN6 518 aa31.74■■■□□ 2.67
RTN2-201ENST00000245923 KCNB2Q92953 911 aa31.74■■■□□ 2.67
RTN2-201ENST00000245923 GLI3P10071 1580 aa31.73■■■□□ 2.67
RTN2-201ENST00000245923 ARFGEF2Q9Y6D5 1785 aa31.73■■■□□ 2.67
RTN2-201ENST00000245923 FOXD4L5Q5VV16 416 aaPredicted RBP31.73■■■□□ 2.67
RTN2-201ENST00000245923 FOXD4L4Q8WXT5 416 aaPredicted RBP31.73■■■□□ 2.67
RTN2-201ENST00000245923 CHAMP1Q96JM3 812 aa31.73■■■□□ 2.67
RTN2-201ENST00000245923 PTH1RQ03431 593 aa31.72■■■□□ 2.67
RTN2-201ENST00000245923 HIP1O00291 1037 aa31.72■■■□□ 2.67
RTN2-201ENST00000245923 AK2P54819 239 aa31.72■■■□□ 2.67
RTN2-201ENST00000245923 COL15A1P39059 1388 aa31.71■■■□□ 2.67
RTN2-201ENST00000245923 EPHA10Q5JZY3 1008 aa31.71■■■□□ 2.67
RTN2-201ENST00000245923 CCDC8Q9H0W5 538 aaPredicted RBP31.7■■■□□ 2.67
RTN2-201ENST00000245923 LIMCH1Q9UPQ0 1083 aa31.7■■■□□ 2.67
RTN2-201ENST00000245923 WDR33Q9C0J8 1336 aaKnown RBP31.69■■■□□ 2.66
RTN2-201ENST00000245923 NASPP49321 788 aaPredicted RBP31.69■■■□□ 2.66
RTN2-201ENST00000245923 TM6SF1Q9BZW5 370 aa31.69■■■□□ 2.66
RTN2-201ENST00000245923 SNRKQ9NRH2 765 aa31.69■■■□□ 2.66
RTN2-201ENST00000245923 MBD3O95983 291 aa31.69■■■□□ 2.66
RTN2-201ENST00000245923 RUFY3Q7L099 469 aa31.69■■■□□ 2.66
RTN2-201ENST00000245923 SIL1Q9H173 461 aa31.69■■■□□ 2.66
RTN2-201ENST00000245923 XIRP1Q702N8 1843 aaKnown RBP31.68■■■□□ 2.66
RTN2-201ENST00000245923 CABP4P57796 275 aa31.68■■■□□ 2.66
RTN2-201ENST00000245923 COPRSQ9NQ92 184 aa31.68■■■□□ 2.66
RTN2-201ENST00000245923 TLR7Q9NYK1 1049 aaKnown RBP31.68■■■□□ 2.66
RTN2-201ENST00000245923 CCDC171Q6TFL3 1326 aa31.68■■■□□ 2.66
RTN2-201ENST00000245923 NECTIN1Q15223 517 aa31.67■■■□□ 2.66
RTN2-201ENST00000245923 CASTP20810 708 aaKnown RBP31.66■■■□□ 2.66
RTN2-201ENST00000245923 KLHDC4Q8TBB5 520 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms