RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
SRSF6-201ENST00000244020 KRT222Q8N1A0 295 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 MNS1Q8NEH6 495 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
SRSF6-201ENST00000244020 STAP2Q9UGK3 403 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 LIG1P18858 919 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 GABPB1Q06547 395 aaPredicted RBP10.93□□□□□ -0.66
SRSF6-201ENST00000244020 ZSCAN25Q6NSZ9 544 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 DEF6Q9H4E7 631 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 TRMT1Q9NXH9 659 aaKnown RBP10.93□□□□□ -0.66
SRSF6-201ENST00000244020 MROH1Q8NDA8 1641 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 DNAJC25Q9H1X3 360 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 LARGE1O95461 756 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 RDXP35241 583 aaKnown RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 IRX3P78415 501 aaPredicted RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 STK3Q13188 491 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 TXNDC2Q86VQ3 553 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 SCAND2PQ9GZW5 306 aaPredicted RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 CTNNA3Q9UI47 895 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 MRVI1Q9Y6F6 885 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 CCDC61Q9Y6R9 512 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 ARHGEF28Q8N1W1 1705 aaKnown RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 H3BQV1 296 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 WASLO00401 505 aaPredicted RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 RAB11FIP3O75154 756 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 CEBPZQ03701 1054 aaKnown RBP10.92□□□□□ -0.66
SRSF6-201ENST00000244020 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 KIF1BPQ96EK5 621 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 GPATCH3Q96I76 525 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 ARAP3Q8WWN8 1544 aa10.92□□□□□ -0.66
SRSF6-201ENST00000244020 KNDC1Q76NI1 1749 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 EIF2S2P20042 333 aaKnown RBP10.91□□□□□ -0.66
SRSF6-201ENST00000244020 ZNF75DP51815 510 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 HYPKQ9NX55 129 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 PPP6R1Q9UPN7 881 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 ZFP91Q96JP5 570 aaPredicted RBP10.91□□□□□ -0.66
SRSF6-201ENST00000244020 DDX19AQ9NUU7 478 aaKnown RBP10.91□□□□□ -0.66
SRSF6-201ENST00000244020 TCHHQ07283 1943 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 CHD1O14646 1710 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 IFIT2P09913 472 aaKnown RBP10.91□□□□□ -0.66
SRSF6-201ENST00000244020 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
SRSF6-201ENST00000244020 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
SRSF6-201ENST00000244020 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
SRSF6-201ENST00000244020 EPB41L2O43491 1005 aaKnown RBP10.9□□□□□ -0.66
SRSF6-201ENST00000244020 VPS53Q5VIR6 699 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
SRSF6-201ENST00000244020 TTC14Q96N46 770 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 SOS1Q07889 1333 aaPredicted RBP10.9□□□□□ -0.66
SRSF6-201ENST00000244020 LMTK2Q8IWU2 1503 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 HSP90B2PQ58FF3 399 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 TCEANC2Q96MN5 208 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 LSG1Q9H089 658 aaKnown RBP10.9□□□□□ -0.66
SRSF6-201ENST00000244020 UHRF1BP1LA0JNW5 1464 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 SKILP12757 684 aa10.9□□□□□ -0.66
SRSF6-201ENST00000244020 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
SRSF6-201ENST00000244020 PSMA5P28066 241 aa10.9□□□□□ -0.67
SRSF6-201ENST00000244020 ME3Q16798 604 aa10.9□□□□□ -0.67
SRSF6-201ENST00000244020 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.67
SRSF6-201ENST00000244020 CDC37L1Q7L3B6 337 aa10.9□□□□□ -0.67
SRSF6-201ENST00000244020 ZNF397Q8NF99 534 aaPredicted RBP10.9□□□□□ -0.67
SRSF6-201ENST00000244020 CACTINQ8WUQ7 758 aaKnown RBP10.9□□□□□ -0.67
SRSF6-201ENST00000244020 GLRX3O76003 335 aaKnown RBP10.89□□□□□ -0.67
SRSF6-201ENST00000244020 AMPHP49418 695 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 TPM4P67936 248 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 KIF18AQ8NI77 898 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 AOX1Q06278 1338 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
SRSF6-201ENST00000244020 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
SRSF6-201ENST00000244020 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
SRSF6-201ENST00000244020 ASXL2Q76L83 1435 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 YEATS2Q9ULM3 1422 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 SYCP1Q15431 976 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 TSPYL1Q9H0U9 437 aa10.89□□□□□ -0.67
SRSF6-201ENST00000244020 ZNF215Q9UL58 517 aaPredicted RBP10.89□□□□□ -0.67
SRSF6-201ENST00000244020 NPHP3Q7Z494 1330 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 FOSBP53539 338 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 HDGFL1Q5TGJ6 251 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.88□□□□□ -0.67
SRSF6-201ENST00000244020 PTPRMP28827 1452 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 CDK12Q9NYV4 1490 aaPredicted RBP10.88□□□□□ -0.67
SRSF6-201ENST00000244020 TIGD1Q96MW7 591 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 ZBTB22O15209 634 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 PTH1RQ03431 593 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 LEKR1Q6ZMV7 388 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms