RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 ERCC3P19447 782 aa6.77□□□□□ -1.33
RFX4-201ENST00000229387 EXOSC9Q06265 439 aaKnown RBP6.77□□□□□ -1.33
RFX4-201ENST00000229387 SLFNL1Q499Z3 407 aa6.77□□□□□ -1.33
RFX4-201ENST00000229387 NME9Q86XW9 330 aa6.77□□□□□ -1.33
RFX4-201ENST00000229387 ANAPC4Q9UJX5 808 aa6.77□□□□□ -1.33
RFX4-201ENST00000229387 DDX49Q9Y6V7 483 aaKnown RBP6.77□□□□□ -1.33
RFX4-201ENST00000229387 CAPN15O75808 1086 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 DCTN1Q14203 1278 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 ZSCAN23Q3MJ62 389 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 C10orf67Q8IYJ2 551 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 MROH1Q8NDA8 1641 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 EIF2AK4Q9P2K8 1649 aaKnown RBP6.76□□□□□ -1.33
RFX4-201ENST00000229387 A0A1W2PP64 1363 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 C21orf2O43822 256 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 ZNF397Q8NF99 534 aaPredicted RBP6.76□□□□□ -1.33
RFX4-201ENST00000229387 ABCA9Q8IUA7 1624 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 INO80Q9ULG1 1556 aaPredicted RBP6.76□□□□□ -1.33
RFX4-201ENST00000229387 ABCA6Q8N139 1617 aa6.76□□□□□ -1.33
RFX4-201ENST00000229387 CPP00450 1065 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 NUTM2GQ5VZR2 741 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 DNAJC14Q6Y2X3 702 aaPredicted RBP6.75□□□□□ -1.33
RFX4-201ENST00000229387 TATDN2Q93075 761 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 SSUH2Q9Y2M2 353 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 SPHKAPQ2M3C7 1700 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 EFCAB6Q5THR3 1501 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 CEP152O94986 1710 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 FAM177BA6PVY3 158 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 PPP2R5AQ15172 486 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 PIK3C2GO75747 1445 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 FRMPD1Q5SYB0 1578 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 RNF17Q9BXT8 1623 aaKnown RBP6.75□□□□□ -1.33
RFX4-201ENST00000229387 RARSP54136 660 aaKnown RBP6.75□□□□□ -1.33
RFX4-201ENST00000229387 TEX35Q5T0J7 233 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 LRSAM1Q6UWE0 723 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 MRRFQ96E11 262 aaKnown RBP6.75□□□□□ -1.33
RFX4-201ENST00000229387 FAM212AQ96EL1 285 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 GDPD2Q9HCC8 539 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 SMC3Q9UQE7 1217 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
RFX4-201ENST00000229387 TET3O43151 1660 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 PRKAR2BP31323 418 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 CD151P48509 253 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 SART3Q15020 963 aaKnown RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 PACS2Q86VP3 889 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 HSCBQ8IWL3 235 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 MSL3Q8N5Y2 521 aaKnown RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 KLHL23Q8NBE8 558 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 PMFBP1Q8TBY8 1022 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 PHACTR3Q96KR7 559 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 IGSF5Q9NSI5 407 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 MROH2AA6NES4 1674 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 FAM83GA6ND36 823 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 TNNT1P13805 278 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 MMS22LQ6ZRQ5 1243 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 ARMCX6Q7L4S7 300 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 STAG1Q8WVM7 1258 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 V9GYY5 206 aaPredicted RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 SMTNL1A8MU46 457 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 PAX7P23759 505 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 PRIM1P49642 420 aaKnown RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 ITPRIPQ8IWB1 547 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 SUDS3Q9H7L9 328 aaPredicted RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 ETAA1Q9NY74 926 aa6.74□□□□□ -1.33
RFX4-201ENST00000229387 RRP15Q9Y3B9 282 aaKnown RBP6.74□□□□□ -1.33
RFX4-201ENST00000229387 MAP3K4Q9Y6R4 1608 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 DIAPH1O60610 1272 aaKnown RBP6.73□□□□□ -1.33
RFX4-201ENST00000229387 ADCY2Q08462 1091 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 FBXO18Q8NFZ0 1043 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 GOLGA5Q8TBA6 731 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 PPM1EQ8WY54 764 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 PCMTD1Q96MG8 357 aaPredicted RBP6.73□□□□□ -1.33
RFX4-201ENST00000229387 ABCC3O15438 1527 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 CT47B1P0C2W7 299 aaPredicted RBP6.73□□□□□ -1.33
RFX4-201ENST00000229387 TMPOP42166 694 aaKnown RBP6.73□□□□□ -1.33
RFX4-201ENST00000229387 NUCB2P80303 420 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 BMS1Q14692 1282 aaKnown RBP6.73□□□□□ -1.33
RFX4-201ENST00000229387 GIGYF2Q6Y7W6 1299 aaKnown RBP6.73□□□□□ -1.33
RFX4-201ENST00000229387 KRBA2Q6ZNG9 492 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 ZNF662Q6ZS27 426 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 LCMT1Q9UIC8 334 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 NUB1Q9Y5A7 615 aa6.73□□□□□ -1.33
RFX4-201ENST00000229387 SGSM2O43147 1006 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 TRMT2AQ8IZ69 625 aaKnown RBP6.72□□□□□ -1.33
RFX4-201ENST00000229387 GPT2Q8TD30 523 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 PSD3Q9NYI0 1048 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 MLH3Q9UHC1 1453 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 RPGRIP1LQ68CZ1 1315 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 RBM6P78332 1123 aaKnown RBP6.72□□□□□ -1.33
RFX4-201ENST00000229387 CCT2P78371 535 aaKnown RBP6.72□□□□□ -1.33
RFX4-201ENST00000229387 KRT24Q2M2I5 525 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 KIAA1524Q8TCG1 905 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 SSH1Q8WYL5 1049 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 FAXDC2Q96IV6 333 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 NKTRP30414 1462 aaKnown RBP6.72□□□□□ -1.33
RFX4-201ENST00000229387 GPS2Q13227 327 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 EXOC8Q8IYI6 725 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms