RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 GDPD2Q9HCC8 539 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 SGSM2O43147 1006 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 INTS4Q96HW7 963 aaKnown RBP18.47■□□□□ 0.55
TGFB1-201ENST00000221930 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 RASEFQ8IZ41 740 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 MAP3K2Q9Y2U5 619 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 STRCQ7RTU9 1775 aa18.47■□□□□ 0.55
TGFB1-201ENST00000221930 TMEM94Q12767 1356 aa18.46■□□□□ 0.55
TGFB1-201ENST00000221930 COL18A1P39060 1754 aa18.46■□□□□ 0.55
TGFB1-201ENST00000221930 HOXB7P09629 217 aa18.46■□□□□ 0.55
TGFB1-201ENST00000221930 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.55
TGFB1-201ENST00000221930 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
TGFB1-201ENST00000221930 PLEKHO1Q53GL0 409 aaPredicted RBP18.46■□□□□ 0.55
TGFB1-201ENST00000221930 ORAI2Q96SN7 254 aa18.46■□□□□ 0.55
TGFB1-201ENST00000221930 PA2G4Q9UQ80 394 aaKnown RBP18.46■□□□□ 0.55
TGFB1-201ENST00000221930 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
TGFB1-201ENST00000221930 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
TGFB1-201ENST00000221930 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
TGFB1-201ENST00000221930 ATF3P18847 181 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 SMAP1Q8IYB5 467 aaPredicted RBP18.45■□□□□ 0.54
TGFB1-201ENST00000221930 DBF4Q9UBU7 674 aaPredicted RBP18.45■□□□□ 0.54
TGFB1-201ENST00000221930 SNX14Q9Y5W7 946 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 RAD50Q92878 1312 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
TGFB1-201ENST00000221930 DTNBO60941 627 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 GCP02774 474 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
TGFB1-201ENST00000221930 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
TGFB1-201ENST00000221930 CPA1P15085 419 aa18.44■□□□□ 0.54
TGFB1-201ENST00000221930 LSG1Q9H089 658 aaKnown RBP18.44■□□□□ 0.54
TGFB1-201ENST00000221930 TPRNQ4KMQ1 711 aa18.44■□□□□ 0.54
TGFB1-201ENST00000221930 PXDNQ92626 1479 aa18.44■□□□□ 0.54
TGFB1-201ENST00000221930 GIGYF1O75420 1035 aaPredicted RBP18.43■□□□□ 0.54
TGFB1-201ENST00000221930 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
TGFB1-201ENST00000221930 MAP7D2Q96T17 732 aa18.43■□□□□ 0.54
TGFB1-201ENST00000221930 NPHP3Q7Z494 1330 aa18.43■□□□□ 0.54
TGFB1-201ENST00000221930 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
TGFB1-201ENST00000221930 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 KIAA1211Q6ZU35 1233 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 RNF214Q8ND24 703 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 AIMP1Q12904 312 aaKnown RBP18.42■□□□□ 0.54
TGFB1-201ENST00000221930 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 CLASRPQ8N2M8 674 aaKnown RBP18.42■□□□□ 0.54
TGFB1-201ENST00000221930 ANKRD24Q8TF21 1146 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 GADD45BO75293 160 aaPredicted RBP18.42■□□□□ 0.54
TGFB1-201ENST00000221930 AK2P54819 239 aa18.42■□□□□ 0.54
TGFB1-201ENST00000221930 MBD3O95983 291 aa18.41■□□□□ 0.54
TGFB1-201ENST00000221930 DIAPH3Q9NSV4 1193 aa18.41■□□□□ 0.54
TGFB1-201ENST00000221930 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
TGFB1-201ENST00000221930 ZSCAN30Q86W11 494 aa18.4■□□□□ 0.54
TGFB1-201ENST00000221930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.4■□□□□ 0.54
TGFB1-201ENST00000221930 PTH1RQ03431 593 aa18.4■□□□□ 0.54
TGFB1-201ENST00000221930 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
TGFB1-201ENST00000221930 RUFY3Q7L099 469 aa18.4■□□□□ 0.54
TGFB1-201ENST00000221930 IPO4Q8TEX9 1081 aaKnown RBP18.4■□□□□ 0.54
TGFB1-201ENST00000221930 TTC14Q96N46 770 aa18.4■□□□□ 0.54
TGFB1-201ENST00000221930 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
TGFB1-201ENST00000221930 CPDO75976 1380 aa18.39■□□□□ 0.53
TGFB1-201ENST00000221930 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.53
TGFB1-201ENST00000221930 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
TGFB1-201ENST00000221930 EPB41L2O43491 1005 aaKnown RBP18.39■□□□□ 0.53
TGFB1-201ENST00000221930 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
TGFB1-201ENST00000221930 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
TGFB1-201ENST00000221930 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
TGFB1-201ENST00000221930 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
TGFB1-201ENST00000221930 MTX1Q13505 466 aa18.38■□□□□ 0.53
TGFB1-201ENST00000221930 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
TGFB1-201ENST00000221930 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
TGFB1-201ENST00000221930 ADCK5Q3MIX3 580 aa18.38■□□□□ 0.53
TGFB1-201ENST00000221930 AACSQ86V21 672 aa18.38■□□□□ 0.53
TGFB1-201ENST00000221930 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
TGFB1-201ENST00000221930 RPAP1Q9BWH6 1393 aaPredicted RBP18.37■□□□□ 0.53
TGFB1-201ENST00000221930 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
TGFB1-201ENST00000221930 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
TGFB1-201ENST00000221930 PRPF40BQ6NWY9 871 aaKnown RBP18.37■□□□□ 0.53
TGFB1-201ENST00000221930 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
TGFB1-201ENST00000221930 SCN11AQ9UI33 1791 aa18.37■□□□□ 0.53
TGFB1-201ENST00000221930 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 LARGE1O95461 756 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 KAZALD1Q96I82 304 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 SUCLG2Q96I99 432 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 SIL1Q9H173 461 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 USP42Q9H9J4 1324 aaKnown RBP18.36■□□□□ 0.53
TGFB1-201ENST00000221930 CCDC8Q9H0W5 538 aaPredicted RBP18.36■□□□□ 0.53
TGFB1-201ENST00000221930 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
TGFB1-201ENST00000221930 TCHHQ07283 1943 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 ZC3H6P61129 1189 aaKnown RBP18.36■□□□□ 0.53
TGFB1-201ENST00000221930 KLHDC4Q8TBB5 520 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.36■□□□□ 0.53
TGFB1-201ENST00000221930 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
TGFB1-201ENST00000221930 GRM8O00222 908 aa18.35■□□□□ 0.53
TGFB1-201ENST00000221930 JAKMIP1Q96N16 626 aaKnown RBP18.35■□□□□ 0.53
TGFB1-201ENST00000221930 SYT1P21579 422 aa18.35■□□□□ 0.53
TGFB1-201ENST00000221930 SASH1O94885 1247 aa18.34■□□□□ 0.53
TGFB1-201ENST00000221930 MYL6BP14649 208 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms