RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
TRPS1-201ENST00000220888 ZNF354CQ86Y25 554 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 CCDC8Q9H0W5 538 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-201ENST00000220888 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 LRRC45Q96CN5 670 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 F8W031 263 aaPredicted RBP12.22□□□□□ -0.45
TRPS1-201ENST00000220888 EIF3JO75822 258 aaKnown RBP12.22□□□□□ -0.45
TRPS1-201ENST00000220888 TAF12Q16514 161 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 FAM193AP78312 1265 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 WASLO00401 505 aaPredicted RBP12.22□□□□□ -0.45
TRPS1-201ENST00000220888 IDEP14735 1019 aa12.22□□□□□ -0.45
TRPS1-201ENST00000220888 PLS1Q14651 629 aa12.21□□□□□ -0.45
TRPS1-201ENST00000220888 ANKRD24Q8TF21 1146 aa12.21□□□□□ -0.45
TRPS1-201ENST00000220888 NAIPQ13075 1403 aa12.21□□□□□ -0.45
TRPS1-201ENST00000220888 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
TRPS1-201ENST00000220888 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
TRPS1-201ENST00000220888 TBCAO75347 108 aaKnown RBP12.21□□□□□ -0.46
TRPS1-201ENST00000220888 UQCRFS1P1P0C7P4 283 aa12.21□□□□□ -0.46
TRPS1-201ENST00000220888 SLC4A8Q2Y0W8 1093 aa12.21□□□□□ -0.46
TRPS1-201ENST00000220888 NCAPD3P42695 1498 aa12.21□□□□□ -0.46
TRPS1-201ENST00000220888 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.46
TRPS1-201ENST00000220888 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.46
TRPS1-201ENST00000220888 MRPS9P82933 396 aaKnown RBP12.21□□□□□ -0.46
TRPS1-201ENST00000220888 PRC1O43663 620 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 STX6O43752 255 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 TDRD12Q587J7 1177 aaKnown RBP12.2□□□□□ -0.46
TRPS1-201ENST00000220888 ERMNQ8TAM6 284 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
TRPS1-201ENST00000220888 CFTRP13569 1480 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 USP37Q86T82 979 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 ZC3H12CQ9C0D7 883 aaKnown RBP12.2□□□□□ -0.46
TRPS1-201ENST00000220888 STX8Q9UNK0 236 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 ACTN2P35609 894 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 CCDC178Q5BJE1 867 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 FILIP1Q7Z7B0 1213 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 STK32BQ9NY57 414 aa12.2□□□□□ -0.46
TRPS1-201ENST00000220888 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
TRPS1-201ENST00000220888 NYXQ9GZU5 481 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 CCDC113Q9H0I3 377 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 SYNCQ9H7C4 482 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRPS1-201ENST00000220888 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 CCDC83Q8IWF9 413 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
TRPS1-201ENST00000220888 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
TRPS1-201ENST00000220888 EYA3Q99504 573 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 FERMT3Q86UX7 667 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 LUZP1Q86V48 1076 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 KIF21BO75037 1637 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 GOLIM4O00461 696 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 PHACTR2O75167 634 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 TNNT1P13805 278 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 KIF4AO95239 1232 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 UBA7P41226 1012 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 MTIF2P46199 727 aaKnown RBP12.18□□□□□ -0.46
TRPS1-201ENST00000220888 PICALMQ13492 652 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 CCDC117Q8IWD4 279 aaPredicted RBP12.18□□□□□ -0.46
TRPS1-201ENST00000220888 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
TRPS1-201ENST00000220888 LMAN1P49257 510 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 TNNI2P48788 182 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
TRPS1-201ENST00000220888 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
TRPS1-201ENST00000220888 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
TRPS1-201ENST00000220888 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
TRPS1-201ENST00000220888 NIP7Q9Y221 180 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRPS1-201ENST00000220888 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
TRPS1-201ENST00000220888 GUCY1B3Q02153 619 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
TRPS1-201ENST00000220888 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
TRPS1-201ENST00000220888 MAP2K1Q02750 393 aaPredicted RBP12.16□□□□□ -0.46
TRPS1-201ENST00000220888 TAOK3Q9H2K8 898 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 F6X3S4 739 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 FERP16591 822 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 SMARCC2Q8TAQ2 1214 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
TRPS1-201ENST00000220888 GOLGA6L10A0A0M3HER8 536 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 NBPF7P0C2Y1 421 aaPredicted RBP12.15□□□□□ -0.46
TRPS1-201ENST00000220888 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms