RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 EP400NLQ6ZTU2 488 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 NCAPGQ9BPX3 1015 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 TMEM63CQ9P1W3 806 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 AK9Q5TCS8 1911 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
GABPB1-201ENST00000220429 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
GABPB1-201ENST00000220429 PSME1Q06323 249 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 ANKRD44Q8N8A2 993 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 IP6K1Q92551 441 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
GABPB1-201ENST00000220429 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
GABPB1-201ENST00000220429 MEIS3Q99687 375 aa16.31■□□□□ 0.2
GABPB1-201ENST00000220429 RASSF4Q9H2L5 321 aa16.31■□□□□ 0.2
GABPB1-201ENST00000220429 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
GABPB1-201ENST00000220429 NUCB2P80303 420 aa16.3■□□□□ 0.2
GABPB1-201ENST00000220429 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
GABPB1-201ENST00000220429 F6X3S4 739 aa16.29■□□□□ 0.2
GABPB1-201ENST00000220429 RPAP2Q8IXW5 612 aaPredicted RBP16.29■□□□□ 0.2
GABPB1-201ENST00000220429 CYP2C19P33261 490 aa16.29■□□□□ 0.2
GABPB1-201ENST00000220429 ICE2Q659A1 982 aa16.29■□□□□ 0.2
GABPB1-201ENST00000220429 TMX1Q9H3N1 280 aa16.29■□□□□ 0.2
GABPB1-201ENST00000220429 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
GABPB1-201ENST00000220429 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
GABPB1-201ENST00000220429 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
GABPB1-201ENST00000220429 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
GABPB1-201ENST00000220429 CT47A1Q5JQC4 288 aaPredicted RBP16.28■□□□□ 0.2
GABPB1-201ENST00000220429 KIF2CQ99661 725 aa16.28■□□□□ 0.2
GABPB1-201ENST00000220429 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
GABPB1-201ENST00000220429 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.19
GABPB1-201ENST00000220429 SLC4A10Q6U841 1118 aa16.27■□□□□ 0.19
GABPB1-201ENST00000220429 STK31Q9BXU1 1019 aa16.27■□□□□ 0.19
GABPB1-201ENST00000220429 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
GABPB1-201ENST00000220429 KCNH5Q8NCM2 988 aa16.26■□□□□ 0.19
GABPB1-201ENST00000220429 CEP83Q9Y592 693 aa16.26■□□□□ 0.19
GABPB1-201ENST00000220429 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
GABPB1-201ENST00000220429 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 KIAA1524Q8TCG1 905 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
GABPB1-201ENST00000220429 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 NECTIN2Q92692 538 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
GABPB1-201ENST00000220429 FLIIQ13045 1269 aa16.25■□□□□ 0.19
GABPB1-201ENST00000220429 C16orf71Q8IYS4 520 aaPredicted RBP16.25■□□□□ 0.19
GABPB1-201ENST00000220429 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
GABPB1-201ENST00000220429 TRPM3Q9HCF6 1732 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-201ENST00000220429 N4BP2Q86UW6 1770 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-201ENST00000220429 CCDC172P0C7W6 258 aa16.24■□□□□ 0.19
GABPB1-201ENST00000220429 GUCY2CP25092 1073 aa16.24■□□□□ 0.19
GABPB1-201ENST00000220429 TMED8Q6PL24 325 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-201ENST00000220429 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
GABPB1-201ENST00000220429 SLIT3O75094 1523 aa16.23■□□□□ 0.19
GABPB1-201ENST00000220429 MED1Q15648 1581 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-201ENST00000220429 REC8O95072 547 aa16.23■□□□□ 0.19
GABPB1-201ENST00000220429 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-201ENST00000220429 GCP02774 474 aa16.23■□□□□ 0.19
GABPB1-201ENST00000220429 UVSSAQ2YD98 709 aa16.23■□□□□ 0.19
GABPB1-201ENST00000220429 EGFL6Q8IUX8 553 aa16.23■□□□□ 0.19
GABPB1-201ENST00000220429 NSFL1CQ9UNZ2 370 aaKnown RBP16.23■□□□□ 0.19
GABPB1-201ENST00000220429 LMO7Q8WWI1 1683 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 PHF14O94880 888 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-201ENST00000220429 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
GABPB1-201ENST00000220429 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-201ENST00000220429 ADCY5O95622 1261 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 USP25Q9UHP3 1055 aa16.22■□□□□ 0.19
GABPB1-201ENST00000220429 MBD3O95983 291 aa16.21■□□□□ 0.19
GABPB1-201ENST00000220429 CASQ1P31415 396 aa16.21■□□□□ 0.19
GABPB1-201ENST00000220429 TTC22Q5TAA0 569 aa16.21■□□□□ 0.19
GABPB1-201ENST00000220429 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
GABPB1-201ENST00000220429 GOLGA6L6A8MZA4 724 aa16.21■□□□□ 0.19
GABPB1-201ENST00000220429 CDC45O75419 566 aa16.21■□□□□ 0.19
GABPB1-201ENST00000220429 SMTNL1A8MU46 457 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 APBB1O00213 710 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 GYS2P54840 703 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 NAA30Q147X3 362 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-201ENST00000220429 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-201ENST00000220429 GPATCH11Q8N954 259 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-201ENST00000220429 ST7Q9NRC1 585 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 TULP1O00294 542 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-201ENST00000220429 CEP120Q8N960 986 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 FAM184AQ8NB25 1140 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 PYCARDQ9ULZ3 195 aa16.2■□□□□ 0.18
GABPB1-201ENST00000220429 HMMRO75330 724 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 PKP1Q13835 747 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.19■□□□□ 0.18
GABPB1-201ENST00000220429 RGPD5Q99666 1765 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 GNAI2P04899 355 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 C10orf67Q8IYJ2 551 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms