RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CCDC9Q9Y3X0 531 aaKnown RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 TTC41PQ6P2S7 1318 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 IQGAP3Q86VI3 1631 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 TTLL5Q6EMB2 1281 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 SEC63Q9UGP8 760 aaKnown RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.11□□□□□ -1.592e-6■■□□□ 13.2
CHD9-201ENST00000219084 CD109Q6YHK3 1445 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 EHMT1Q9H9B1 1298 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 PLCH2O75038 1416 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 PIP4K2BP78356 416 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 RBM27Q9P2N5 1060 aaKnown RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 SETD1BQ9UPS6 1966 aaKnown RBP5.11□□□□□ -1.59
CHD9-201ENST00000219084 PRPHP41219 470 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 FAM193AP78312 1265 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 GIMAP7Q8NHV1 300 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 CEP126Q9P2H0 1117 aa5.11□□□□□ -1.59
CHD9-201ENST00000219084 KIAA1210Q9ULL0 1709 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 ZFYP08048 801 aaPredicted RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 TNIP1Q15025 636 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TMEM266Q2M3C6 531 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 SMC5Q8IY18 1101 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 SSH1Q8WYL5 1049 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 C8orf76Q96K31 380 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 WDR7Q9Y4E6 1490 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 RAD50Q92878 1312 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 KIF5BP33176 963 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 EIF5P55010 431 aaKnown RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 CABP4P57796 275 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 SPAG1Q07617 926 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 ZNF530Q6P9A1 599 aaPredicted RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 CWC27Q6UX04 472 aaKnown RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 CCDC102AQ96A19 550 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 BABAM1Q9NWV8 329 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 CABP1Q9NZU7 370 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 BAG4O95429 457 aaKnown RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 TRIM27P14373 513 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 ENOX2Q16206 610 aaKnown RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 SPECC1LQ69YQ0 1117 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 ANKRD24Q8TF21 1146 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TIGD1Q96MW7 591 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 MPHOSPH8Q99549 860 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 PLVAPQ9BX97 442 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TEX13AQ9BXU3 409 aaPredicted RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 SLC12A5Q9H2X9 1139 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TTC12Q9H892 705 aaPredicted RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 NLRP2Q9NX02 1062 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 SSH2Q76I76 1423 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 STARD3NLO95772 234 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 ZSCAN23Q3MJ62 389 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TBC1D9Q6ZT07 1266 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 CEP128Q6ZU80 1094 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TMTC2Q8N394 836 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 DISP3Q9P2K9 1392 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 PAFAH1B1P43034 410 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 STXBP4Q6ZWJ1 553 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 CEP112Q8N8E3 955 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TSGA10Q9BZW7 698 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 DBF4Q9UBU7 674 aaPredicted RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 TRPM1Q7Z4N2 1603 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 NECTIN2Q92692 538 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 CETN1Q12798 172 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 SNW1Q13573 536 aaKnown RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 SMC1AQ14683 1233 aaKnown RBP5.1□□□□□ -1.59
CHD9-201ENST00000219084 FAM200AQ8TCP9 573 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 AIDAQ96BJ3 306 aa5.1□□□□□ -1.59
CHD9-201ENST00000219084 TDO2P48775 406 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 TRAF1Q13077 416 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 CLUL1Q15846 466 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 CEP135Q66GS9 1140 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 A2MP01023 1474 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 NOS1P29475 1434 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 CEP170Q5SW79 1584 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 TMEM132EQ6IEE7 984 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 C1orf115Q9H7X2 142 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 CNNM2Q9H8M5 875 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.09□□□□□ -1.593e-8■■■■■ 125
CHD9-201ENST00000219084 ADCY5O95622 1261 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 ZSCAN22P10073 491 aaPredicted RBP5.09□□□□□ -1.59
CHD9-201ENST00000219084 TNNT1P13805 278 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 IGHMBP2P38935 993 aaKnown RBP5.09□□□□□ -1.59
CHD9-201ENST00000219084 AIMP1Q12904 312 aaKnown RBP5.09□□□□□ -1.59
CHD9-201ENST00000219084 RAB3GAP1Q15042 981 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 FBXW7Q969H0 707 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 PPP1R2P41236 205 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 SSRP1Q08945 709 aaKnown RBP5.09□□□□□ -1.59
CHD9-201ENST00000219084 FAM69CQ0P6D2 419 aa5.09□□□□□ -1.59
CHD9-201ENST00000219084 CTCFLQ8NI51 663 aaPredicted RBP5.09□□□□□ -1.59
CHD9-201ENST00000219084 NSRP1Q9H0G5 558 aaKnown RBP5.09□□□□□ -1.59
CHD9-201ENST00000219084 MAP3K12Q12852 859 aa5.09□□□□□ -1.6
CHD9-201ENST00000219084 AFAP1Q8N556 730 aa5.09□□□□□ -1.6
CHD9-201ENST00000219084 ANKS4BQ8N8V4 417 aa5.09□□□□□ -1.6
CHD9-201ENST00000219084 IQCDQ96DY2 449 aa5.09□□□□□ -1.6
CHD9-201ENST00000219084 CCDC94Q9BW85 323 aaPredicted RBP5.09□□□□□ -1.6
CHD9-201ENST00000219084 C14orf93Q9H972 538 aaKnown RBP5.09□□□□□ -1.6
CHD9-201ENST00000219084 QRICH2Q9H0J4 1663 aa5.09□□□□□ -1.6
CHD9-201ENST00000219084 ARFGAP3Q9NP61 516 aa5.09□□□□□ -1.6
CHD9-201ENST00000219084 PRDM15P57071 1507 aaPredicted RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 IQCA1Q86XH1 822 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 ECHDC1Q9NTX5 307 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms