RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TOGARAM1Q9Y4F4 1720 aa36.43■■■■□ 3.42
PABPN1-201ENST00000216727 PLBD2Q8NHP8 589 aa36.42■■■■□ 3.42
PABPN1-201ENST00000216727 BICC1Q9H694 974 aaKnown RBP36.42■■■■□ 3.42
PABPN1-201ENST00000216727 DISP2A7MBM2 1401 aa36.42■■■■□ 3.42
PABPN1-201ENST00000216727 PIP4K2AP48426 406 aaPredicted RBP36.42■■■■□ 3.42
PABPN1-201ENST00000216727 ARFGEF2Q9Y6D5 1785 aa36.42■■■■□ 3.42
PABPN1-201ENST00000216727 NUTM1Q86Y26 1132 aa36.41■■■■□ 3.42
PABPN1-201ENST00000216727 COL16A1Q07092 1604 aaPredicted RBP36.41■■■■□ 3.42
PABPN1-201ENST00000216727 USP42Q9H9J4 1324 aaKnown RBP36.4■■■■□ 3.42
PABPN1-201ENST00000216727 NBPF26B4DH59 902 aa36.4■■■■□ 3.42
PABPN1-201ENST00000216727 NBPF14Q5TI25 921 aa36.4■■■■□ 3.42
PABPN1-201ENST00000216727 NBPF10Q6P3W6 841 aaKnown RBP36.4■■■■□ 3.42
PABPN1-201ENST00000216727 NBPF15Q8N660 670 aa36.4■■■■□ 3.42
PABPN1-201ENST00000216727 OS9Q13438 667 aaPredicted RBP36.39■■■■□ 3.42
PABPN1-201ENST00000216727 COL15A1P39059 1388 aa36.39■■■■□ 3.42
PABPN1-201ENST00000216727 TMOD3Q9NYL9 352 aa36.38■■■■□ 3.41
PABPN1-201ENST00000216727 PI4K2BQ8TCG2 481 aa36.37■■■■□ 3.41
PABPN1-201ENST00000216727 PLCH1Q4KWH8 1693 aa36.37■■■■□ 3.41
PABPN1-201ENST00000216727 TRIM6-TRIM34B2RNG4 842 aa36.36■■■■□ 3.41
PABPN1-201ENST00000216727 CLASRPQ8N2M8 674 aaKnown RBP36.36■■■■□ 3.41
PABPN1-201ENST00000216727 TTC41PQ6P2S7 1318 aa36.35■■■■□ 3.41
PABPN1-201ENST00000216727 RABEP1Q15276 862 aa36.35■■■■□ 3.41
PABPN1-201ENST00000216727 PTCD1O75127 700 aaKnown RBP36.34■■■■□ 3.41
PABPN1-201ENST00000216727 CHMLP26374 656 aa36.34■■■■□ 3.41
PABPN1-201ENST00000216727 RILPL2Q969X0 211 aa36.34■■■■□ 3.41
PABPN1-201ENST00000216727 ESYT1Q9BSJ8 1104 aa36.34■■■■□ 3.41
PABPN1-201ENST00000216727 PA2G4Q9UQ80 394 aaKnown RBP36.34■■■■□ 3.41
PABPN1-201ENST00000216727 AFDNP55196 1824 aaKnown RBP36.34■■■■□ 3.41
PABPN1-201ENST00000216727 UNC5CLQ8IV45 518 aa36.31■■■■□ 3.4
PABPN1-201ENST00000216727 A1BGP04217 495 aa36.3■■■■□ 3.4
PABPN1-201ENST00000216727 VSIG10Q8N0Z9 540 aa36.3■■■■□ 3.4
PABPN1-201ENST00000216727 RBM42Q9BTD8 480 aaKnown RBP36.3■■■■□ 3.4
PABPN1-201ENST00000216727 G3BP1Q13283 466 aaKnown RBP eCLIP36.29■■■■□ 3.48e-7■□□□□ 8.4
PABPN1-201ENST00000216727 LRP6O75581 1613 aa36.29■■■■□ 3.4
PABPN1-201ENST00000216727 NUP188Q5SRE5 1749 aa36.29■■■■□ 3.4
PABPN1-201ENST00000216727 RABL6Q3YEC7 729 aaPredicted RBP36.28■■■■□ 3.4
PABPN1-201ENST00000216727 EPHA10Q5JZY3 1008 aa36.28■■■■□ 3.4
PABPN1-201ENST00000216727 PIGBQ92521 554 aa36.28■■■■□ 3.4
PABPN1-201ENST00000216727 TEX13AQ9BXU3 409 aaPredicted RBP36.28■■■■□ 3.4
PABPN1-201ENST00000216727 GLRX3O76003 335 aaKnown RBP36.27■■■■□ 3.4
PABPN1-201ENST00000216727 SPRYD3Q8NCJ5 442 aa36.27■■■■□ 3.4
PABPN1-201ENST00000216727 K7ELQ4 463 aaPredicted RBP36.27■■■■□ 3.4
PABPN1-201ENST00000216727 CHMP5Q9NZZ3 219 aa36.27■■■■□ 3.4
PABPN1-201ENST00000216727 ATP5J2-PTCD1G3V325 749 aa36.26■■■■□ 3.4
PABPN1-201ENST00000216727 FRAT2O75474 233 aaPredicted RBP36.26■■■■□ 3.4
PABPN1-201ENST00000216727 SASH1O94885 1247 aa36.26■■■■□ 3.4
PABPN1-201ENST00000216727 CD2BP2O95400 341 aaKnown RBP36.26■■■■□ 3.4
PABPN1-201ENST00000216727 CASP7P55210 303 aa36.26■■■■□ 3.4
PABPN1-201ENST00000216727 TTLL7Q6ZT98 887 aa36.26■■■■□ 3.4
PABPN1-201ENST00000216727 A0A087WZG4 1122 aa36.25■■■■□ 3.39
PABPN1-201ENST00000216727 EPB41L2O43491 1005 aaKnown RBP36.25■■■■□ 3.39
PABPN1-201ENST00000216727 UBE3BQ7Z3V4 1068 aa36.25■■■■□ 3.39
PABPN1-201ENST00000216727 GPATCH3Q96I76 525 aa36.25■■■■□ 3.39
PABPN1-201ENST00000216727 CNTROBQ8N137 903 aa36.25■■■■□ 3.39
PABPN1-201ENST00000216727 ITGB4P16144 1822 aa36.25■■■■□ 3.39
PABPN1-201ENST00000216727 AK9Q5TCS8 1911 aa36.24■■■■□ 3.39
PABPN1-201ENST00000216727 PHLPP1O60346 1717 aa36.24■■■■□ 3.39
PABPN1-201ENST00000216727 WNK3Q9BYP7 1800 aa36.24■■■■□ 3.39
PABPN1-201ENST00000216727 IFIT2P09913 472 aaKnown RBP36.24■■■■□ 3.39
PABPN1-201ENST00000216727 COPRSQ9NQ92 184 aa36.24■■■■□ 3.39
PABPN1-201ENST00000216727 ECHDC1Q9NTX5 307 aa36.24■■■■□ 3.39
PABPN1-201ENST00000216727 DDIT3P35638 169 aa36.24■■■■□ 3.39
PABPN1-201ENST00000216727 ASAP1Q9ULH1 1129 aa36.23■■■■□ 3.39
PABPN1-201ENST00000216727 EXOC5O00471 708 aa36.22■■■■□ 3.39
PABPN1-201ENST00000216727 ATG3Q9NT62 314 aa36.22■■■■□ 3.39
PABPN1-201ENST00000216727 H7C1W4 665 aa36.22■■■■□ 3.39
PABPN1-201ENST00000216727 BCL9O00512 1426 aa36.21■■■■□ 3.39
PABPN1-201ENST00000216727 RFX5P48382 616 aaPredicted RBP36.2■■■■□ 3.39
PABPN1-201ENST00000216727 AACSQ86V21 672 aa36.2■■■■□ 3.39
PABPN1-201ENST00000216727 CDCA7Q9BWT1 371 aaPredicted RBP36.2■■■■□ 3.39
PABPN1-201ENST00000216727 CWC25Q9NXE8 425 aaPredicted RBP36.2■■■■□ 3.39
PABPN1-201ENST00000216727 CCDC191Q8NCU4 936 aa36.18■■■■□ 3.38
PABPN1-201ENST00000216727 JARID2Q92833 1246 aaPredicted RBP36.17■■■■□ 3.38
PABPN1-201ENST00000216727 EAF2Q96CJ1 260 aaPredicted RBP36.17■■■■□ 3.38
PABPN1-201ENST00000216727 CIZ1Q9ULV3 898 aaPredicted RBP36.17■■■■□ 3.38
PABPN1-201ENST00000216727 MAP4K4O95819 1239 aaPredicted RBP36.17■■■■□ 3.38
PABPN1-201ENST00000216727 MCCP23508 829 aa36.17■■■■□ 3.38
PABPN1-201ENST00000216727 THRAP3Q9Y2W1 955 aaKnown RBP36.17■■■■□ 3.38
PABPN1-201ENST00000216727 NRAPQ86VF7 1730 aa36.16■■■■□ 3.38
PABPN1-201ENST00000216727 PTPN12Q05209 780 aaKnown RBP36.16■■■■□ 3.38
PABPN1-201ENST00000216727 SIL1Q9H173 461 aa36.16■■■■□ 3.38
PABPN1-201ENST00000216727 ANO2Q9NQ90 1003 aa36.16■■■■□ 3.38
PABPN1-201ENST00000216727 STARD3NLO95772 234 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 ANAPC15P60006 121 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 DNAJC10Q8IXB1 793 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 KLHDC4Q8TBB5 520 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 IL17RAQ96F46 866 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 ZBTB3Q9H5J0 574 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 TJP1Q07157 1748 aa36.15■■■■□ 3.38
PABPN1-201ENST00000216727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP36.14■■■■□ 3.38
PABPN1-201ENST00000216727 ST18O60284 1047 aa36.13■■■■□ 3.38
PABPN1-201ENST00000216727 SPATA31A1Q5TZJ5 1347 aa36.13■■■■□ 3.38
PABPN1-201ENST00000216727 SGSM2O43147 1006 aa36.12■■■■□ 3.37
PABPN1-201ENST00000216727 ADAMTS2O95450 1211 aa36.12■■■■□ 3.37
PABPN1-201ENST00000216727 DEKP35659 375 aaKnown RBP36.12■■■■□ 3.37
PABPN1-201ENST00000216727 FOXO4P98177 505 aa36.12■■■■□ 3.37
PABPN1-201ENST00000216727 ISCA1Q9BUE6 129 aa36.11■■■■□ 3.37
PABPN1-201ENST00000216727 HSP90AA1P07900 732 aaKnown RBP36.1■■■■□ 3.37
PABPN1-201ENST00000216727 TOM1O60784 492 aa36.1■■■■□ 3.37
PABPN1-201ENST00000216727 LMBR1LQ6UX01 489 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms