RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 NEURL1BA8MQ27 555 aa9.76□□□□□ -0.85
HMGXB4-201ENST00000216106 ANO2Q9NQ90 1003 aa9.76□□□□□ -0.85
HMGXB4-201ENST00000216106 NHSL1Q5SYE7 1610 aa9.76□□□□□ -0.85
HMGXB4-201ENST00000216106 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 UTYO14607 1347 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 SHANK3Q9BYB0 1731 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 MCM4P33991 863 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 ANKRD13DQ6ZTN6 518 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 DDX54Q8TDD1 881 aaKnown RBP9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 METTL22Q9BUU2 404 aaPredicted RBP9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 IL25Q9H293 177 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 IL2RBP14784 551 aa9.75□□□□□ -0.85
HMGXB4-201ENST00000216106 GCKRQ14397 625 aa9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 JARID2Q92833 1246 aaPredicted RBP9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 EVA1CP58658 441 aa9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 ST18O60284 1047 aa9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 SIL1Q9H173 461 aa9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 UBR2Q8IWV8 1755 aa9.74□□□□□ -0.85
HMGXB4-201ENST00000216106 KLHDC4Q8TBB5 520 aa9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 TNPO1Q92973 898 aaKnown RBP9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 CNTROBQ8N137 903 aa9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 ATP5J2-PTCD1G3V325 749 aa9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 PTCD1O75127 700 aaKnown RBP9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 EPHA10Q5JZY3 1008 aa9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 ERC1Q8IUD2 1116 aa9.73□□□□□ -0.85
HMGXB4-201ENST00000216106 IFIT2P09913 472 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 RAB3GAP1Q15042 981 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 AACSQ86V21 672 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 TTC41PQ6P2S7 1318 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 SASH1O94885 1247 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 USP42Q9H9J4 1324 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 PAPPAQ13219 1627 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 KCPQ6ZWJ8 1503 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 TOGARAM1Q9Y4F4 1720 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 GLRX3O76003 335 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 MCCP23508 829 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 G3BP1Q13283 466 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 UBE3BQ7Z3V4 1068 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 NEK4P51957 841 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 NBPF14Q5TI25 921 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
HMGXB4-201ENST00000216106 ECHDC1Q9NTX5 307 aa9.71□□□□□ -0.85
HMGXB4-201ENST00000216106 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 AEBP2Q6ZN18 517 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 GPATCH3Q96I76 525 aa9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 A1BGP04217 495 aa9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 CWC27Q6UX04 472 aaKnown RBP9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 PLBD2Q8NHP8 589 aa9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 EAF2Q96CJ1 260 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 CCDC8Q9H0W5 538 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 BTG4Q9NY30 223 aa9.71□□□□□ -0.86
HMGXB4-201ENST00000216106 A0A087WZG4 1122 aa9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 SSFA2P28290 1259 aa9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 TTLL7Q6ZT98 887 aa9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 TLR7Q9NYK1 1049 aaKnown RBP9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 SGSM2O43147 1006 aa9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 ZGPATQ8N5A5 531 aaKnown RBP9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 GZF1Q9H116 711 aaPredicted RBP9.7□□□□□ -0.86
HMGXB4-201ENST00000216106 ANAPC15P60006 121 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 NOL8Q76FK4 1167 aaKnown RBP9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 RAD50Q92878 1312 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 TRAK2O60296 914 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 KAT6BQ8WYB5 2073 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 DIAPH3Q9NSV4 1193 aa9.69□□□□□ -0.86
HMGXB4-201ENST00000216106 PKP1Q13835 747 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 TMOD3Q9NYL9 352 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 ROBO1Q9Y6N7 1651 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 TNS2Q63HR2 1409 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 HSPA4P34932 840 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 PTPN12Q05209 780 aaKnown RBP9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 TMX3Q96JJ7 454 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 LSG1Q9H089 658 aaKnown RBP9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 ZNF330Q9Y3S2 320 aaPredicted RBP9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 TJP1Q07157 1748 aa9.68□□□□□ -0.86
HMGXB4-201ENST00000216106 RFX5P48382 616 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 CASP7P55210 303 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 RABL6Q3YEC7 729 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 BOLA2Q9H3K6 86 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 EVI5LQ96CN4 794 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 ARXQ96QS3 562 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 ITGB4P16144 1822 aa9.67□□□□□ -0.86
HMGXB4-201ENST00000216106 EPB41L2O43491 1005 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms