RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 NAP1L5Q96NT1 182 aaPredicted RBP13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 PYGBP11216 843 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 GSE1Q14687 1217 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 SPATA31A3Q5VYP0 1347 aa13.14□□□□□ -0.31
APOBEC3D-201ENST00000216099 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 C1orf141Q5JVX7 400 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 TBC1D32Q96NH3 1257 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 HSPA2P54652 639 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 MRC1P22897 1456 aa13.13□□□□□ -0.31
APOBEC3D-201ENST00000216099 MICAL1Q8TDZ2 1067 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 RAB11FIP3O75154 756 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 TEFQ10587 303 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 MEIS3Q99687 375 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 C5P01031 1676 aa13.12□□□□□ -0.31
APOBEC3D-201ENST00000216099 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3D-201ENST00000216099 HMMRO75330 724 aa13.11□□□□□ -0.31
APOBEC3D-201ENST00000216099 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
APOBEC3D-201ENST00000216099 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
APOBEC3D-201ENST00000216099 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
APOBEC3D-201ENST00000216099 GNAI3P08754 354 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 VTI1AQ96AJ9 217 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 PPME1Q9Y570 386 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 GLMNQ92990 594 aa13.1□□□□□ -0.31
APOBEC3D-201ENST00000216099 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
APOBEC3D-201ENST00000216099 F6X3S4 739 aa13.09□□□□□ -0.31
APOBEC3D-201ENST00000216099 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
APOBEC3D-201ENST00000216099 MEGF6O75095 1541 aa13.09□□□□□ -0.31
APOBEC3D-201ENST00000216099 GNAI2P04899 355 aa13.09□□□□□ -0.31
APOBEC3D-201ENST00000216099 TCF3P15923 654 aa13.09□□□□□ -0.31
APOBEC3D-201ENST00000216099 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 TEX2Q8IWB9 1127 aa13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 PCMTD1Q96MG8 357 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 BECN1Q14457 450 aa13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
APOBEC3D-201ENST00000216099 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 RBM27Q9P2N5 1060 aaKnown RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 SREK1Q8WXA9 508 aaKnown RBP13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
APOBEC3D-201ENST00000216099 PLEKHM2Q8IWE5 1019 aa13.06□□□□□ -0.32
APOBEC3D-201ENST00000216099 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
APOBEC3D-201ENST00000216099 GOPCQ9HD26 462 aa13.06□□□□□ -0.32
APOBEC3D-201ENST00000216099 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
APOBEC3D-201ENST00000216099 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 IBTKQ9P2D0 1353 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 KCNQ3O43525 872 aa13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 TAGLNQ01995 201 aaKnown RBP13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
APOBEC3D-201ENST00000216099 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 PHKG2P15735 406 aa13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 FOXD4L6Q3SYB3 417 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 FOXD4L3Q6VB84 417 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 GLI3P10071 1580 aa13.04□□□□□ -0.32
APOBEC3D-201ENST00000216099 PEX14O75381 377 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 CDC45O75419 566 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 AMHR2Q16671 573 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 USP44Q9H0E7 712 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 SLC52A2Q9HAB3 445 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 KLHL42Q9P2K6 505 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 ADCY9O60503 1353 aa13.03□□□□□ -0.32
APOBEC3D-201ENST00000216099 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.32
APOBEC3D-201ENST00000216099 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.32
APOBEC3D-201ENST00000216099 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms