RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 VSIG10Q8N0Z9 540 aa22.96■■□□□ 1.27
CTSA-201ENST00000191018 SUCLG2Q96I99 432 aa22.96■■□□□ 1.27
CTSA-201ENST00000191018 BCL11AQ9H165 835 aa22.96■■□□□ 1.27
CTSA-201ENST00000191018 DOT1LQ8TEK3 1739 aa22.95■■□□□ 1.27
CTSA-201ENST00000191018 ATG3Q9NT62 314 aa22.95■■□□□ 1.26
CTSA-201ENST00000191018 ASAP1Q9ULH1 1129 aa22.95■■□□□ 1.26
CTSA-201ENST00000191018 UBAP1LF5GYI3 381 aa22.94■■□□□ 1.26
CTSA-201ENST00000191018 A1BGP04217 495 aa22.94■■□□□ 1.26
CTSA-201ENST00000191018 SDSP20132 328 aa22.94■■□□□ 1.26
CTSA-201ENST00000191018 STAP2Q9UGK3 403 aa22.94■■□□□ 1.26
CTSA-201ENST00000191018 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
CTSA-201ENST00000191018 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
CTSA-201ENST00000191018 HSP90AB4PQ58FF6 505 aa22.94■■□□□ 1.26
CTSA-201ENST00000191018 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
CTSA-201ENST00000191018 RHPN1Q8TCX5 695 aa22.94■■□□□ 1.26
CTSA-201ENST00000191018 SPATA31A5Q5VU36 1347 aa22.93■■□□□ 1.26
CTSA-201ENST00000191018 SPATA31A7Q8IWB4 1347 aa22.93■■□□□ 1.26
CTSA-201ENST00000191018 COL15A1P39059 1388 aa22.93■■□□□ 1.26
CTSA-201ENST00000191018 MX1P20591 662 aa22.93■■□□□ 1.26
CTSA-201ENST00000191018 RBM25P49756 843 aaKnown RBP22.93■■□□□ 1.26
CTSA-201ENST00000191018 KIF1BPQ96EK5 621 aa22.93■■□□□ 1.26
CTSA-201ENST00000191018 TEX13AQ9BXU3 409 aaPredicted RBP22.92■■□□□ 1.26
CTSA-201ENST00000191018 BICC1Q9H694 974 aaKnown RBP22.92■■□□□ 1.26
CTSA-201ENST00000191018 AOX1Q06278 1338 aa22.91■■□□□ 1.26
CTSA-201ENST00000191018 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.9■■□□□ 1.26
CTSA-201ENST00000191018 TTLL7Q6ZT98 887 aa22.9■■□□□ 1.26
CTSA-201ENST00000191018 IL1RAPL2Q9NP60 686 aa22.9■■□□□ 1.26
CTSA-201ENST00000191018 EIF5BO60841 1220 aaKnown RBP22.9■■□□□ 1.26
CTSA-201ENST00000191018 SLC4A3P48751 1232 aa22.9■■□□□ 1.26
CTSA-201ENST00000191018 BARGINQ6ZT62 677 aa22.9■■□□□ 1.26
CTSA-201ENST00000191018 TJP1Q07157 1748 aa22.89■■□□□ 1.26
CTSA-201ENST00000191018 DDB1Q16531 1140 aa22.89■■□□□ 1.25
CTSA-201ENST00000191018 DAXXQ9UER7 740 aaPredicted RBP22.88■■□□□ 1.25
CTSA-201ENST00000191018 KAT6BQ8WYB5 2073 aa22.88■■□□□ 1.25
CTSA-201ENST00000191018 JCADQ9P266 1359 aa22.88■■□□□ 1.25
CTSA-201ENST00000191018 DNAJC10Q8IXB1 793 aa22.88■■□□□ 1.25
CTSA-201ENST00000191018 CASP7P55210 303 aa22.87■■□□□ 1.25
CTSA-201ENST00000191018 ATP5J2-PTCD1G3V325 749 aa22.86■■□□□ 1.25
CTSA-201ENST00000191018 BECN1Q14457 450 aa22.86■■□□□ 1.25
CTSA-201ENST00000191018 EPHA10Q5JZY3 1008 aa22.86■■□□□ 1.25
CTSA-201ENST00000191018 TSHZ3Q63HK5 1081 aa22.86■■□□□ 1.25
CTSA-201ENST00000191018 RABL6Q3YEC7 729 aaPredicted RBP22.85■■□□□ 1.25
CTSA-201ENST00000191018 ERC1Q8IUD2 1116 aa22.85■■□□□ 1.25
CTSA-201ENST00000191018 SLC4A9Q96Q91 983 aa22.85■■□□□ 1.25
CTSA-201ENST00000191018 PA2G4Q9UQ80 394 aaKnown RBP22.85■■□□□ 1.25
CTSA-201ENST00000191018 STARD3NLO95772 234 aa22.85■■□□□ 1.25
CTSA-201ENST00000191018 RBM42Q9BTD8 480 aaKnown RBP22.85■■□□□ 1.25
CTSA-201ENST00000191018 A0A087WZG4 1122 aa22.84■■□□□ 1.25
CTSA-201ENST00000191018 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
CTSA-201ENST00000191018 NUTM1Q86Y26 1132 aa22.84■■□□□ 1.25
CTSA-201ENST00000191018 USP42Q9H9J4 1324 aaKnown RBP22.84■■□□□ 1.25
CTSA-201ENST00000191018 H7C1W4 665 aa22.83■■□□□ 1.25
CTSA-201ENST00000191018 UBE3BQ7Z3V4 1068 aa22.83■■□□□ 1.25
CTSA-201ENST00000191018 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.25
CTSA-201ENST00000191018 BCL9LQ86UU0 1499 aa22.83■■□□□ 1.25
CTSA-201ENST00000191018 OS9Q13438 667 aaPredicted RBP22.83■■□□□ 1.24
CTSA-201ENST00000191018 CASC1Q6TDU7 716 aa22.83■■□□□ 1.24
CTSA-201ENST00000191018 MARCH10Q8NA82 808 aaPredicted RBP22.83■■□□□ 1.24
CTSA-201ENST00000191018 ZBTB3Q9H5J0 574 aa22.83■■□□□ 1.24
CTSA-201ENST00000191018 AK9Q5TCS8 1911 aa22.82■■□□□ 1.24
CTSA-201ENST00000191018 PI4K2BQ8TCG2 481 aa22.82■■□□□ 1.24
CTSA-201ENST00000191018 SYTL4Q96C24 671 aaPredicted RBP22.82■■□□□ 1.24
CTSA-201ENST00000191018 CYP19A1P11511 503 aaPredicted RBP22.81■■□□□ 1.24
CTSA-201ENST00000191018 CCDC191Q8NCU4 936 aa22.81■■□□□ 1.24
CTSA-201ENST00000191018 TBC1D2Q9BYX2 928 aa22.81■■□□□ 1.24
CTSA-201ENST00000191018 CWC25Q9NXE8 425 aaPredicted RBP22.81■■□□□ 1.24
CTSA-201ENST00000191018 CICQ96RK0 1608 aaPredicted RBP22.81■■□□□ 1.24
CTSA-201ENST00000191018 CLASRPQ8N2M8 674 aaKnown RBP22.81■■□□□ 1.24
CTSA-201ENST00000191018 KIF2CQ99661 725 aa22.81■■□□□ 1.24
CTSA-201ENST00000191018 SASH1O94885 1247 aa22.8■■□□□ 1.24
CTSA-201ENST00000191018 RFX5P48382 616 aaPredicted RBP22.8■■□□□ 1.24
CTSA-201ENST00000191018 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
CTSA-201ENST00000191018 ISCA1Q9BUE6 129 aa22.8■■□□□ 1.24
CTSA-201ENST00000191018 CCDC9Q9Y3X0 531 aaKnown RBP22.8■■□□□ 1.24
CTSA-201ENST00000191018 TTC41PQ6P2S7 1318 aa22.8■■□□□ 1.24
CTSA-201ENST00000191018 COPRSQ9NQ92 184 aa22.79■■□□□ 1.24
CTSA-201ENST00000191018 G3BP1Q13283 466 aaKnown RBP eCLIP22.79■■□□□ 1.24
CTSA-201ENST00000191018 VPS72Q15906 364 aa22.79■■□□□ 1.24
CTSA-201ENST00000191018 FNBP4Q8N3X1 1017 aaPredicted RBP22.78■■□□□ 1.24
CTSA-201ENST00000191018 USP26Q9BXU7 913 aa22.78■■□□□ 1.24
CTSA-201ENST00000191018 SPATA31A6Q5VVP1 1343 aa22.78■■□□□ 1.24
CTSA-201ENST00000191018 FOXO4P98177 505 aa22.77■■□□□ 1.24
CTSA-201ENST00000191018 TRIM28Q13263 835 aaKnown RBP22.77■■□□□ 1.24
CTSA-201ENST00000191018 TCIRG1Q13488 830 aa22.77■■□□□ 1.24
CTSA-201ENST00000191018 C8orf37Q96NL8 207 aa22.77■■□□□ 1.24
CTSA-201ENST00000191018 ANKRD36CQ5JPF3 1778 aa22.77■■□□□ 1.24
CTSA-201ENST00000191018 PTPN12Q05209 780 aaKnown RBP22.77■■□□□ 1.24
CTSA-201ENST00000191018 NGLY1Q96IV0 654 aa22.77■■□□□ 1.24
CTSA-201ENST00000191018 TRIM6-TRIM34B2RNG4 842 aa22.76■■□□□ 1.23
CTSA-201ENST00000191018 ERC2O15083 957 aa22.76■■□□□ 1.23
CTSA-201ENST00000191018 KIF6Q6ZMV9 814 aa22.76■■□□□ 1.23
CTSA-201ENST00000191018 KLHDC4Q8TBB5 520 aa22.76■■□□□ 1.23
CTSA-201ENST00000191018 MAP3K15Q6ZN16 1313 aa22.76■■□□□ 1.23
CTSA-201ENST00000191018 RREB1Q92766 1687 aa22.75■■□□□ 1.23
CTSA-201ENST00000191018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.75■■□□□ 1.23
CTSA-201ENST00000191018 REC8O95072 547 aa22.75■■□□□ 1.23
CTSA-201ENST00000191018 CHMLP26374 656 aa22.75■■□□□ 1.23
CTSA-201ENST00000191018 SNX21Q969T3 373 aa22.75■■□□□ 1.23
CTSA-201ENST00000191018 RILPL2Q969X0 211 aa22.75■■□□□ 1.23
CTSA-201ENST00000191018 ZBTB1Q9Y2K1 713 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms