RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 DGAT2Q96PD7 388 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 SLC25A23Q9BV35 468 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-213ENST00000642137 RMND5AQ9H871 391 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 IL17BQ9UHF5 180 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 PCDHGB4Q9UN71 923 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 NDUFAF1Q9Y375 327 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 NUP214P35658 2090 aaPredicted RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 LOC100653049A0A140TA62 436 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 A0A1W2PQ72 361 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 A0A1W2PS29 197 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 C9JVG2 144 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 NR5A2O00482 541 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 OR10H2O60403 315 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 KRT34O76011 436 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 IFI6P09912 130 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 COX4I1P13073 169 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 LIFP15018 202 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 CD1EP15812 388 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 TNNI3P19429 210 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 CAPN3P20807 821 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 NCBP2P52298 156 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 RPS18P62269 152 aaKnown RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 DUSP2Q05923 314 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 KRT72Q14CN4 511 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 TERF2Q15554 542 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 ELAVL1Q15717 326 aaKnown RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 MAPKAPK3Q16644 382 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 VPS26BQ4G0F5 336 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 FAM69BQ5VUD6 431 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 TRPM8Q7Z2W7 1104 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 TREML1Q86YW5 311 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 PSMA8Q8TAA3 256 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF675Q8TD23 568 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 RIT1Q92963 219 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 VPS33AQ96AX1 596 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 ERP27Q96DN0 273 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 CMTM5Q96DZ9 223 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 CCDC115Q96NT0 180 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 IP6K3Q96PC2 410 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 TUBB6Q9BUF5 446 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 ADAP2Q9NPF8 381 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 SLAMF7Q9NQ25 335 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 PNO1Q9NRX1 252 aaKnown RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 LEF1Q9UJU2 399 aaPredicted RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
LINC00339-213ENST00000642137 MRPS18BQ9Y676 258 aaKnown RBP11.52□□□□□ -0.57
LINC00339-213ENST00000642137 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-213ENST00000642137 BBIP1A8MTZ0 92 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 A8MUA0 341 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 PLOD2O00469 737 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 SOCS6O14544 535 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 DYRK3O43781 588 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 C6orf47O95873 294 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 NT5EP21589 574 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 TRPC1P48995 793 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 MGAT2Q10469 447 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 SPRED3Q2MJR0 410 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 PRICKLE4Q2TBC4 344 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 TIGD2Q4W5G0 525 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 SFT2D3Q587I9 215 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF628Q5EBL2 1059 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 COQ5Q5HYK3 327 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 LANCL3Q6ZV70 420 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF551Q7Z340 670 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-213ENST00000642137 RAB43Q86YS6 212 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 MORN4Q8NDC4 146 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 OR14A16Q8NHC5 309 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 DNAJB8Q8NHS0 232 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ADAMTS17Q8TE56 1095 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 PTPMT1Q8WUK0 201 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-213ENST00000642137 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 DAZLQ92904 295 aaKnown RBP11.51□□□□□ -0.57
LINC00339-213ENST00000642137 CTHRC1Q96CG8 243 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ITCHQ96J02 903 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 LPAR4Q99677 370 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF700Q9H0M5 742 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 CXorf21Q9HAI6 301 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 TAS2R9Q9NYW1 312 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF639Q9UID6 485 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 MAN2B2Q9Y2E5 1009 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 HS3ST3B1Q9Y662 390 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 CLCA3PQ9Y6N3 262 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 SPTBN4Q9H254 2564 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
LINC00339-213ENST00000642137 A0A087WV62 115 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ASPDHA6ND91 283 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 CCT8L1PA6NM43 557 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 C17orf105B2RV13 164 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ANGPT2O15123 496 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 KLK10O43240 276 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PLOD3O60568 738 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ERN1O75460 977 aaKnown RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 BCAS2O75934 225 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 CPSF4O95639 269 aaKnown RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NPPAP01160 153 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms