RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PHC1P78364 1004 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 GNA13Q14344 377 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 TRIP10Q15642 601 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 DEFB133Q30KQ1 61 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 TBCELQ5QJ74 424 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 OGFRL1Q5TC84 451 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-234ENST00000642041 B3GNT8Q7Z7M8 397 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 DTX1Q86Y01 620 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 OR4A15Q8NGL6 344 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 ADAMTS18Q8TE60 1221 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 CCDC3Q9BQI4 270 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 SEMA6CQ9H3T2 930 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 SEMA3GQ9NS98 782 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 SLC25A37Q9NYZ2 338 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 SLAMF8Q9P0V8 285 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 LRCH1Q9Y2L9 728 aa16.25■□□□□ 0.19
PHGDH-234ENST00000642041 FEZF1A0PJY2 475 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 CXCR6O00574 342 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 HAT1O14929 419 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 PDPK1O15530 556 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 DEAF1O75398 565 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-234ENST00000642041 CPSF4O95639 269 aaKnown RBP16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SERPIND1P05546 499 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 IL3P08700 152 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 FAM58BPP0C7Q3 252 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 JMJD7P0C870 316 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 ATP6V1C1P21283 382 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 PTPN6P29350 595 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 NTSP30990 170 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 FRKP42685 505 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-234ENST00000642041 EMP3P54852 163 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SESN3P58005 492 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 BIKQ13323 160 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 TAF11Q15544 211 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 NDUFA9Q16795 377 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SPPL2CQ8IUH8 684 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 EFCAB3Q8N7B9 438 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 OR52N2Q8NGI0 321 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 PSMA8Q8TAA3 256 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 GFM2Q969S9 779 aaKnown RBP16.24■□□□□ 0.19
PHGDH-234ENST00000642041 ZDHHC12Q96GR4 267 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 TCTN2Q96GX1 697 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 CENPNQ96H22 339 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SLC38A3Q99624 504 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 ASPSCR1Q9BZE9 553 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SYNDIG1Q9H7V2 258 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SPHK1Q9NYA1 384 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 SLC22A7Q9Y694 548 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 MED13Q9UHV7 2174 aa16.24■□□□□ 0.19
PHGDH-234ENST00000642041 CROCCQ5TZA2 2017 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 YY2O15391 372 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 ERI3O43414 337 aaKnown RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 AGFG2O95081 481 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 EML2O95834 649 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 POLR2CP19387 275 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 ATP5A1P25705 553 aaKnown RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 PEBP1P30086 187 aaKnown RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 MPIP34949 423 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 MAPK10P53779 464 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 MANFP55145 182 aaKnown RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 MTPNP58546 118 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 GK3PQ14409 553 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 MYBPC3Q14896 1274 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 ZNF630Q2M218 657 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 VMACQ2NL98 169 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 TOR1AIP1Q5JTV8 583 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 MRM1Q6IN84 353 aaKnown RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 TMEM64Q6YI46 380 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 RNF44Q7L0R7 432 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 TICAM1Q8IUC6 712 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 SLC35F3Q8IY50 421 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 ANKFN1Q8N957 763 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 C11orf65Q8NCR3 313 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 FAM156AQ8NDB6 213 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 ZFP90Q8TF47 636 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 CANT1Q8WVQ1 401 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 FAM162AQ96A26 154 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 OR2A5Q96R48 311 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 DPH2Q9BQC3 489 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 C9orf16Q9BUW7 83 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 ZNF717Q9BY31 904 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 TMEM38AQ9H6F2 299 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 LYRM4Q9HD34 91 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 PRDM7Q9NQW5 492 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 PISDQ9UG56 409 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 EGFL7Q9UHF1 273 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 POMT2Q9UKY4 750 aa16.23■□□□□ 0.19
PHGDH-234ENST00000642041 SPENQ96T58 3664 aaKnown RBP16.23■□□□□ 0.19
PHGDH-234ENST00000642041 PRAMEF33A0A0G2JMD5 474 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 SYNDIG1LA6NDD5 238 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 NUDT21O43809 227 aaKnown RBP16.22■□□□□ 0.19
PHGDH-234ENST00000642041 B3GALT2O43825 422 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 PRAMEF10O60809 474 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 SORBS2O94875 1100 aaKnown RBP16.22■□□□□ 0.19
PHGDH-234ENST00000642041 UBXN7O94888 489 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 ELAVL4P26378 380 aaKnown RBP16.22■□□□□ 0.19
PHGDH-234ENST00000642041 CCKBRP32239 447 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 PRIM2P49643 509 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 SLAMF1Q13291 335 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 RGNQ15493 299 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms