RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 E7EQ34 232 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 EPOP01588 193 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 KIAA1161Q6NSJ0 714 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 C17orf107Q6ZR85 190 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 LAS2Q8IYD9 372 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 LILRA3Q8N6C8 439 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 OR4C15Q8NGM1 316 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 BTN2A2Q8WVV5 523 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 DNAJA4Q8WW22 397 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 MGME1Q9BQP7 344 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 MND1Q9BWT6 205 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 MVB12BQ9H7P6 319 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 LSM2Q9Y333 95 aaKnown RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 SSNA1O43805 119 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 MRPS14O60783 128 aaKnown RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TGFB1P01137 390 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TRAPPC2P0DI81 140 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TRAPPC2BP0DI82 140 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TFPIP10646 304 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 SPTBP11277 2137 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ELK1P19419 428 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 XPAP23025 273 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 CCR7P32248 378 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ATP6V1E1P36543 226 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 RPL35P42766 123 aaKnown RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 CACNG1Q06432 222 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 CLLU1OSQ5K130 101 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ACSM5Q6NUN0 579 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TMEM91Q6ZNR0 172 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ZNF366Q8N895 744 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 LSM14AQ8ND56 463 aaKnown RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 OR4F15Q8NGB8 312 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 C9orf43Q8TAL5 461 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 WBP2Q969T9 261 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 PDFQ9HBH1 243 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ZFP64Q9NPA5 681 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 STARD7Q9NQZ5 370 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ZFR2Q9UPR6 939 aaKnown RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 HIST1H2AGP0C0S8 130 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 HIST1H2ADP20671 130 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 CDK6Q00534 326 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 OC90Q02509 493 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 DSC1Q08554 894 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 LGALSLQ3ZCW2 172 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 SLC24A5Q71RS6 500 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TRIM69Q86WT6 500 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 NPAS3Q8IXF0 933 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 NANOGP1Q8N7R0 232 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 HUS1BQ8NHY5 278 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ZFPM2Q8WW38 1151 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ST8SIA4Q92187 359 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 ARMC5Q96C12 935 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 HIST1H2AHQ96KK5 128 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 HIST1H2AJQ99878 128 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 H2AFJQ9BTM1 129 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 NTMT1Q9BV86 223 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 SLC29A3Q9BZD2 475 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 CLEC4MQ9H2X3 399 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-227ENST00000640957 NDUFB11Q9NX14 153 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 VPS29Q9UBQ0 182 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 FTSJ1Q9UET6 329 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 TRPS1Q9UHF7 1281 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
SCARB2-227ENST00000640957 MANSC4A6NHS7 340 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-227ENST00000640957 ZAR1LA6NP61 321 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 IL1RNP18510 177 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 TYMPP19971 482 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 CORO1AP31146 461 aaKnown RBP13.06□□□□□ -0.32
SCARB2-227ENST00000640957 NFATC2Q13469 925 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 HEPACAMQ14CZ8 416 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 NCF4Q15080 339 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 ZNF730Q6ZMV8 503 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 FAM92BQ6ZTR7 304 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 TAS1R1Q7RTX1 841 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 OR52I1Q8NGK6 324 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 SOCS4Q8WXH5 440 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 PIP5K1AQ99755 562 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 SPNS1Q9H2V7 528 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 KLHL1Q9NR64 748 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 RNF186Q9NXI6 227 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 OR6C2Q9NZP2 312 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 HCN2Q9UL51 889 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 IQCMA0A1B0GVH7 501 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 SYN3O14994 580 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 SEMA7AO75326 666 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 RAF1P04049 648 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 BCHEP06276 602 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 BPIP17213 487 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 GIFP27352 417 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 STK19P49842 368 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-227ENST00000640957 CLDN20P56880 219 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms