RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ZNF185O15231 689 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 RAD51CO43502 376 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 GLRA3O75311 464 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CREG1O75629 220 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 JUNP05412 331 aaKnown RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 UROSP10746 265 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SDC4P31431 198 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 QPRTQ15274 297 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ATP6V1FQ16864 119 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CLEC16AQ2KHT3 1053 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SEZ6Q53EL9 994 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 EIPR1Q53HC9 387 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 TEX44Q53QW1 395 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ANKRD54Q6NXT1 300 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SLC46A3Q7Z3Q1 461 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 FAM220AQ7Z4H9 259 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 TECPR1Q7Z6L1 1165 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 FAM98AQ8NCA5 519 aaKnown RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ZDHHC1Q8WTX9 485 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 FAR1Q8WVX9 515 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 BOD1Q96IK1 185 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 LRR1Q96L50 414 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 NOL4LQ96MY1 436 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CPPED1Q9BRF8 314 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM216Q9P0N5 145 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DNAJB11Q9UBS4 358 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CHRNA9Q9UGM1 479 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DNPEPQ9ULA0 475 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 MMACHCQ9Y4U1 282 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 NPTNQ9Y639 398 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CDY1Q9Y6F8 540 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SYCP2Q9BX26 1530 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DUXAA6NLW8 204 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 OR6C76A6NM76 312 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DISC1C4P0D8 188 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 TAF5LO75529 589 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 WDR47O94967 919 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 C1QBP02746 253 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SPP1P10451 314 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF250P15622 560 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CALCRP30988 508 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DCTDP32321 178 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 GRK5P34947 590 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 LHX1P48742 406 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 EPHA10Q5JZY3 1008 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CCDC117Q8IWD4 279 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DMRTC2Q8IXT2 367 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 OR4A15Q8NGL6 344 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 GPR150Q8NGU9 434 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 EDAQ92838 391 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF707Q96C28 371 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CERS2Q96G23 380 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ALKBH7Q9BT30 221 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 B3GNT5Q9BYG0 378 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 RTN4RQ9BZR6 473 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 WDR55Q9H6Y2 383 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 GPR173Q9NS66 373 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 NEO1Q92859 1461 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 FER1L6Q2WGJ9 1857 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 TBC1D3KA0A087X1G2 549 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 MAGEB6P1A0A0J9YX57 407 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 C9orf170A2RU37 121 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ADH1BP00325 375 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SOD2P04179 222 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 RPN2P04844 631 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 RPS9P46781 194 aaKnown RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 NPY4RP50391 375 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SLC13A2Q13183 592 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ACTBL2Q562R1 376 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 BICRALQ6AI39 1079 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 GALNT10Q86SR1 603 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 THOC6Q86W42 341 aaKnown RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ZDHHC21Q8IVQ6 265 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 NXNL1Q96CM4 212 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CPNE2Q96FN4 548 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CPNE1Q99829 537 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 P2RY13Q9BPV8 354 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ELOVL1Q9BW60 279 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ZDHHC6Q9H6R6 413 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 MLXIPQ9HAP2 919 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CREBZFQ9NS37 354 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 DDIT4Q9NX09 232 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ANGPT4Q9Y264 503 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SLC6A5Q9Y345 797 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 A0A0G2JMP0 313 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 A0A0G2JND7 137 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 A0A0X1KG70 313 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ANHXE9PGG2 379 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 OR2J2O76002 312 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF30P17039 623 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 ETV6P41212 452 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 CDH13P55290 713 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SUMO3P55854 103 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 SESN2P58004 480 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 RBX1P62877 108 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 NR1I3Q14994 352 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 TSNQ15631 228 aaKnown RBP4.12□□□□□ -1.75
SCN3A-209ENST00000639244 C4orf17Q53FE4 359 aa4.12□□□□□ -1.75
SCN3A-209ENST00000639244 GRINAQ7Z429 371 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms