RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 IQANK1A0A1B0GTG1 560 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 LRATO95237 230 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 MLYCDO95822 493 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 DUSP2Q05923 314 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 TBL3Q12788 808 aaKnown RBP16.38■□□□□ 0.21
PNKP-230ENST00000638016 SPRED3Q2MJR0 410 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 PIGGQ5H8A4 983 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 CCNYL2Q5T2Q4 361 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 NDUFAF5Q5TEU4 345 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 OR52E8Q6IFG1 317 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 TMEM64Q6YI46 380 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 DOLPP1Q86YN1 238 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 AGAP11Q8TF27 550 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 RIT1Q92963 219 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 KCNA7Q96RP8 456 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 TRPS1Q9UHF7 1281 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 LIPGQ9Y5X9 500 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 PKDREJQ9NTG1 2253 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 TEX15Q9BXT5 2789 aa16.38■□□□□ 0.21
PNKP-230ENST00000638016 MANBAO00462 879 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 ADAM10O14672 748 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 TAC1P20366 129 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 ATP5F1P24539 256 aaPredicted RBP16.37■□□□□ 0.21
PNKP-230ENST00000638016 PIGAP37287 484 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 MAPK12P53778 367 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 CASP6P55212 293 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 SLC37A1P57057 533 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 PLGLB1Q02325 96 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 EBPQ15125 230 aaKnown RBP16.37■□□□□ 0.21
PNKP-230ENST00000638016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.37■□□□□ 0.21
PNKP-230ENST00000638016 PRAMEF20Q5VT98 475 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 RNF111Q6ZNA4 994 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 RTL4Q6ZR62 310 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 GPALPP1Q8IXQ4 340 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 C1orf52Q8N6N3 182 aaKnown RBP16.37■□□□□ 0.21
PNKP-230ENST00000638016 POGLUT1Q8NBL1 392 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 OR5L2Q8NGL0 311 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 NUBPLQ8TB37 319 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 EPS8L3Q8TE67 593 aaKnown RBP16.37■□□□□ 0.21
PNKP-230ENST00000638016 UBLCP1Q8WVY7 318 aaPredicted RBP16.37■□□□□ 0.21
PNKP-230ENST00000638016 TTTY12Q9BZ98 90 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 WWTR1Q9GZV5 400 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 L2HGDHQ9H9P8 463 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 WDR41Q9HAD4 459 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 MEMO1Q9Y316 297 aa16.37■□□□□ 0.21
PNKP-230ENST00000638016 CELA3AP09093 270 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 SLC35E2P0CK97 266 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 ESRRAP11474 423 aaPredicted RBP16.36■□□□□ 0.21
PNKP-230ENST00000638016 PIK3R1P27986 724 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 PRKAA2P54646 552 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 FOXA1P55317 472 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 PPIAP62937 165 aaKnown RBP16.36■□□□□ 0.21
PNKP-230ENST00000638016 MPEG1Q2M385 716 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 ZNF791Q3KP31 576 aaPredicted RBP16.36■□□□□ 0.21
PNKP-230ENST00000638016 SH2D5Q6ZV89 423 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 GPRIN3Q6ZVF9 776 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 CD163Q86VB7 1156 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 RPRMLQ8N4K4 120 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 SIMC1Q8NDZ2 872 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 GSTO2Q9H4Y5 243 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 CXorf21Q9HAI6 301 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 TUBA8Q9NY65 449 aaPredicted RBP16.36■□□□□ 0.21
PNKP-230ENST00000638016 TNFRSF10DQ9UBN6 386 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 FETUBQ9UGM5 382 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 ADAM29Q9UKF5 820 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 SNX6Q9UNH7 406 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 TIMM22Q9Y584 194 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 EXPH5Q8NEV8 1989 aa16.36■□□□□ 0.21
PNKP-230ENST00000638016 G3V2L1 256 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 UBFD1O14562 309 aaKnown RBP16.35■□□□□ 0.21
PNKP-230ENST00000638016 DYRK3O43781 588 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 GLSO94925 669 aaPredicted RBP16.35■□□□□ 0.21
PNKP-230ENST00000638016 TPOP07202 933 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 FREM3P0C091 2139 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 PRF1P14222 555 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 IMPDH1P20839 514 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 NT5EP21589 574 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 SOX18P35713 384 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 FEN1P39748 380 aaKnown RBP16.35■□□□□ 0.21
PNKP-230ENST00000638016 XKP51811 444 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 HMGCS1Q01581 520 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 FOXO1Q12778 655 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 SP5Q6BEB4 398 aaPredicted RBP16.35■□□□□ 0.21
PNKP-230ENST00000638016 FAM111BQ6SJ93 734 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 OPN5Q6U736 354 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 FAM47EQ6ZV65 393 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 ZNF808Q8N4W9 903 aaPredicted RBP16.35■□□□□ 0.21
PNKP-230ENST00000638016 OR10G3Q8NGC4 313 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 OR5M3Q8NGP4 307 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 ACMSDQ8TDX5 336 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 TM4SF18Q96CE8 201 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 ART5Q96L15 291 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 ZNF382Q96SR6 550 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 PELOQ9BRX2 385 aaKnown RBP16.35■□□□□ 0.21
PNKP-230ENST00000638016 ACPTQ9BZG2 426 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 SH2D2AQ9NP31 389 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 CES1P1Q9UKY3 287 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 DTX4Q9Y2E6 619 aa16.35■□□□□ 0.21
PNKP-230ENST00000638016 PCDHA9Q9Y5H5 950 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms